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working on mid-sized test example

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Heng Li
2020-03-27 16:55:28 -04:00
parent bd89bd500c
commit 7079a9f306
2 changed files with 2 additions and 5 deletions
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anchor.cpp
+2 -2
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@@ -108,8 +108,8 @@ void ha_get_new_candidates(ha_abuf_t *ab, int64_t rid, UC_Read *ucr, overlap_reg
fprintf(stderr, "B\t%ld\t%ld\n", (long)overlap_list->length, (long)overlap_list->mapped_overlaps_length);
for (int i = 0; i < (int)overlap_list->length; ++i) {
overlap_region *r = &overlap_list->list[i];
fprintf(stderr, "C\t%d\t%d\t%d\t%c\t%d\t%d\t%d\t%c\t%d\n", (int)r->x_id, (int)r->x_pos_s, (int)r->x_pos_e, "+-"[r->x_pos_strand],
(int)r->y_id, (int)r->y_pos_s, (int)r->y_pos_e, "+-"[r->y_pos_strand], (int)r->shared_seed);
fprintf(stderr, "C\t%d\t%d\t%d\t%c\t%d\t%d\t%d\t%c\t%d\t%d\n", (int)r->x_id, (int)r->x_pos_s, (int)r->x_pos_e, "+-"[r->x_pos_strand],
(int)r->y_id, (int)r->y_pos_s, (int)r->y_pos_e, "+-"[r->y_pos_strand], (int)r->shared_seed, r->is_match);
}
#endif
}