additional cluster for phasing

This commit is contained in:
chhylp123
2023-02-20 23:38:27 -05:00
parent 3abd3793fb
commit 7d5c793109
4 changed files with 286 additions and 14 deletions
+3
View File
@@ -4,6 +4,7 @@
#define __STDC_LIMIT_MACROS
#include <stdint.h>
#include "hic.h"
#include "rcut.h"
#define get_hit_srev(x, k) ((x).a.a[(k)].s>>63)
#define get_hit_slen(x, k) ((x).a.a[(k)].len>>32)
@@ -71,4 +72,6 @@ void ha_aware_order(kvec_pe_hit *r_hits, asg_t *rg, ma_ug_t *ug_fa, ma_ug_t *ug_
ug_opt_t *opt, uint32_t round);
spg_t *horder_utg(kvec_pe_hit *i_hits, uint64_t i_hits_uid_bits, uint64_t i_hits_pos_mode,
asg_t *i_rg, ma_ug_t* i_ug, bubble_type* bub, ug_opt_t *opt);
void layout_mc_clus_t(const mc_match_t *ma, uint32_t *a, uint32_t an, scg_t *sg, uint32_t *buf, uint64_t *idx, ma_ug_t* ug);
#endif