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new realignment

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chhylp123
2022-05-03 00:59:24 -04:00
parent fdf24d5589
commit 8138941a26
8 changed files with 728 additions and 116 deletions
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htab.h
+2 -2
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@@ -88,8 +88,8 @@ const int ha_pt_cnt(const ha_pt_t *h, uint64_t hash);
int write_pt_index(void *flt_tab, ha_pt_t *ha_idx, All_reads* r, hifiasm_opt_t* opt, char* file_name);
int load_pt_index(void **r_flt_tab, ha_pt_t **r_ha_idx, All_reads* r, hifiasm_opt_t* opt, char* file_name);
int uidx_write(void *flt_tab, ha_pt_t *ha_idx, char* file_name);
int uidx_load(void **r_flt_tab, ha_pt_t **r_ha_idx, char* file_name);
int uidx_write(void *flt_tab, ha_pt_t *ha_idx, char* file_name, ma_ug_t *ug);
int uidx_load(void **r_flt_tab, ha_pt_t **r_ha_idx, char* file_name, ma_ug_t *ug);
int write_ct_index(void *ct_idx, char* file_name);
int load_ct_index(void **ct_idx, char* file_name);
int query_ct_index(void* ct_idx, uint64_t hash);