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avoid misassemblies; better polyploidy graph

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chhylp123
2023-03-22 12:23:53 -04:00
parent d4773a497f
commit 86b7dd424a
12 changed files with 1931 additions and 79 deletions
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inter.h
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@@ -126,5 +126,6 @@ uint32_t infer_se(uint32_t qs, uint32_t qe, uint32_t ts, uint32_t te, uint32_t r
uint32_t rqs, uint32_t rqe, uint32_t *rts, uint32_t *rte);
uint32_t clean_contain_g(const ug_opt_t *uopt, asg_t *sg, uint32_t push_trans);
void dedup_contain_g(const ug_opt_t *uopt, asg_t *sg);
void trans_base_mmhap_infer(ma_ug_t *ug, asg_t *sg, ug_opt_t *uopt, kv_u_trans_t *res);
#endif