diff --git a/CommandLines.cpp b/CommandLines.cpp index a71b022..6683c16 100644 --- a/CommandLines.cpp +++ b/CommandLines.cpp @@ -64,13 +64,13 @@ void init_opt(hifiasm_opt_t* asm_opt) asm_opt->pat_index = NULL; asm_opt->mat_index = NULL; asm_opt->thread_num = 1; - asm_opt->k_mer_length = 41; - asm_opt->mz_win = 41; + asm_opt->k_mer_length = 51; + asm_opt->mz_win = 51; asm_opt->bf_shift = 37; asm_opt->high_factor = 5.0f; asm_opt->no_HPC = 0; asm_opt->no_kmer_flt = 0; - asm_opt->max_n_chain = 1000; + asm_opt->max_n_chain = 400; asm_opt->k_mer_min_freq = 3; asm_opt->k_mer_max_freq = 66; asm_opt->load_index_from_disk = 1; diff --git a/CommandLines.h b/CommandLines.h index b820b35..0a7d6af 100644 --- a/CommandLines.h +++ b/CommandLines.h @@ -3,7 +3,7 @@ #include -#define HA_VERSION "0.3.0-dirty-r190" +#define HA_VERSION "0.3.0-dirty-r191" #define VERBOSE 0 #define VERBOSE_GFA 0