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r523-phasing-across chains

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chhylp123
2023-02-21 15:44:45 -05:00
parent 7d5c793109
commit 8ea2d5a622
4 changed files with 342 additions and 59 deletions
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7
rcut.cpp
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@@ -2498,12 +2498,11 @@ void renew_mc_clus_t_adv(mc_clus_t *bc, uint32_t *a, uint32_t a_n)
}
}
}
/**
///need enable it later
kv_resize(uint32_t, tmp, bc->cc.nn.n);
kv_resize(uint64_t, bc->cc.ng, bc->cc.ng.n+bc->bub->ug->g->n_seq);
layout_mc_clus_t(bc->mg->e, bc->cc.nn.a, bc->cc.nn.n, &(bc->sg), tmp.a, bc->cc.ng.a+bc->cc.ng.n, bc->bub->ug);
**/
layout_mc_clus_t(bc->mg->e, bc->cc.nn.a, bc->cc.nn.n, &(bc->sg), tmp.a, bc->cc.ng.a+bc->cc.ng.n, bc->bub->ug, 0.199999, 0.800001, 4);
for (k = 0; k < a_n; k++) bc->lock[a[k]] = 0;
kv_destroy(sc_l); kv_destroy(sc_r); kv_destroy(sc_m); kv_destroy(tmp);
// fprintf(stderr, "[M::%s] a_n::%u, bc->cc.nn.n::%u, bc->cc.ng.n::%u, bbn::%u, bub_occ::%u, bc->bub->b_ug->u.n::%u\n", __func__,
@@ -3360,7 +3359,7 @@ mc_clus_t *init_mc_clus_t(const mc_opt_t *opt, mc_g_t *mg, bubble_type* bub, uin
void des_mc_clus_t(mc_clus_t *p)
{
if((!p)) return;
uint32_t k; free(p->lock);
uint32_t k; free(p->lock); osg_destroy(p->sg.g);
if(p->asn) {
free(p->asn->a); free(p->asn);
}