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chhylp123
2022-11-17 09:31:56 -05:00
parent 2c7b164f11
commit 9831afaf26
12 changed files with 1296 additions and 127 deletions
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6
CommandLines.cpp
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@@ -143,6 +143,12 @@ void Print_H(hifiasm_opt_t* asm_opt)
fprintf(stderr, " --l-msjoin INT\n");
fprintf(stderr, " detect misjoined unitigs of >=INT in size; 0 to disable [%lu]\n", asm_opt->misjoin_len);
fprintf(stderr, " Ultra-Long-integration (beta):\n");
fprintf(stderr, " --ul FILEs file names of Ultra-Long reads [r1.fq,r2.fq,...]\n");
fprintf(stderr, " --ul-rate FLOAT\n");
fprintf(stderr, " similarity threshold for UL-to-HiFi alignment [%.3g]\n", asm_opt->ul_error_rate);
fprintf(stderr, "Example: ./hifiasm -o NA12878.asm -t 32 NA12878.fq.gz\n");
fprintf(stderr, "See `https://hifiasm.readthedocs.io/en/latest/' or `man ./hifiasm.1' for complete documentation.\n");
}