From a06ee394338d36d238b1a6e5ba3d2767b8cfdd6c Mon Sep 17 00:00:00 2001 From: Heng Li Date: Mon, 13 Apr 2020 19:51:15 -0400 Subject: [PATCH] r244: use 3 rounds of error correction by default --- CommandLines.cpp | 2 +- CommandLines.h | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/CommandLines.cpp b/CommandLines.cpp index 423baee..8c599cc 100644 --- a/CommandLines.cpp +++ b/CommandLines.cpp @@ -81,7 +81,7 @@ void init_opt(hifiasm_opt_t* asm_opt) asm_opt->k_mer_max_freq = 66; asm_opt->load_index_from_disk = 1; asm_opt->write_index_to_disk = 1; - asm_opt->number_of_round = 2; + asm_opt->number_of_round = 3; asm_opt->adapterLen = 0; asm_opt->clean_round = 4; asm_opt->small_pop_bubble_size = 100000; diff --git a/CommandLines.h b/CommandLines.h index 4d948b6..97a20e1 100644 --- a/CommandLines.h +++ b/CommandLines.h @@ -3,7 +3,7 @@ #include -#define HA_VERSION "0.4.0-dirty-r243" +#define HA_VERSION "0.4.0-dirty-r244" #define VERBOSE 0