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better resolution for complex regions

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chhylp123
2023-02-27 09:35:50 -05:00
parent 04f660fd8c
commit a0f2f70d91
5 changed files with 245 additions and 40 deletions
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Overlaps.cpp
+14
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@@ -6315,6 +6315,20 @@ int asg_topocut_aux(asg_t *g, uint32_t v, int max_ext)
return n_ext;
}
int asg_topocut_aux_pg(asg_t *g, uint32_t v, int max_ext, uint32_t *rv)
{
int32_t n_ext; (*rv) = (uint32_t)-1;
for (n_ext = 1; n_ext < max_ext && v != (uint32_t)-1; ++n_ext) {
if (asg_check_unambi1(g, v^1) == (uint32_t)-1) {
--n_ext; (*rv) = v^1;/// asg_arc_n(g, v) >= 2
break;
}
v = asg_check_unambi1(g, v);
}
return n_ext;
}
// delete short arcs
///for best graph?
int asg_arc_del_short_diploid_by_length(asg_t *g, float drop_ratio, int max_ext,