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better resolution for complex regions

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chhylp123
2023-02-27 09:35:50 -05:00
parent 04f660fd8c
commit a0f2f70d91
5 changed files with 245 additions and 40 deletions
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Overlaps.h
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@@ -1182,6 +1182,7 @@ void write_dbug(ma_ug_t* ug, FILE* fp);
int asg_arc_identify_simple_bubbles_multi(asg_t *g, bub_label_t* x, int check_cross);
uint8_t get_tip_trio_infor(asg_t *sg, uint32_t begNode);
int asg_topocut_aux(asg_t *g, uint32_t v, int max_ext);
int asg_topocut_aux_pg(asg_t *g, uint32_t v, int max_ext, uint32_t *rv);
int asg_arc_del_triangular_directly(asg_t *g, long long min_edge_length,
ma_hit_t_alloc* reverse_sources, R_to_U* ruIndex);
int asg_arc_del_short_diploid_by_exact(asg_t *g, int max_ext, ma_hit_t_alloc* sources);