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update k-mer peaks

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chhylp123
2020-07-07 13:20:25 -04:00
parent 2e56ef7db5
commit a25c37ed89
9 changed files with 106 additions and 28 deletions
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Overlaps.cpp
+2
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@@ -13489,6 +13489,7 @@ void write_all_data_to_disk(ma_hit_t_alloc* sources, ma_hit_t_alloc* reverse_sou
write_ma_hit_ts(reverse_sources, RNF->total_reads, gfa_name);
free(gfa_name);
fprintf(stderr, "bin files have been written.\n");
}
int load_all_data_from_disk(ma_hit_t_alloc **sources, ma_hit_t_alloc **reverse_sources, char* output_file_name)
@@ -26342,6 +26343,7 @@ long long bubble_dist, int read_graph, int write)
asg_t *sg = NULL;
ma_sub_t* coverage_cut = NULL;
// debug_info_of_specfic_read("m64011_190329_072846/80545633/ccs", sources, reverse_sources, -1, "clean");
///actually min_thres = asm_opt.max_short_tip + 1 there are asm_opt.max_short_tip reads