cleaner assembly graph

2026-10-03 07:48:12 +08:00 · 2022-12-06 09:52:00 -05:00
parent 786f8bdff0
commit a3b72457f0
8 changed files with 426 additions and 38 deletions
@@ -1788,7 +1788,7 @@ void chain_trans_ovlp(hap_cov_t *cover, utg_trans_t *o, ma_ug_t *ug, asg_t *read
            }

            p_v = v; len += l;
-            if(len >= targetBaseLen)
+            if(len >= targetBaseLen)///might be not right for centromeres 
            {
                xOcc = aOcc;
                break;