update for reference read hpc

2026-09-15 12:47:57 +08:00 · 2024-10-27 13:22:06 -04:00
parent fc98214321
commit ade800990e
6 changed files with 201 additions and 36 deletions
--- a/Assembly.cpp
+++ b/Assembly.cpp
@@ -994,7 +994,7 @@ void ha_ec(int64_t round, int num_pround, int des_idx, uint64_t *tot_b, uint64_t

    cal_ec_r(asm_opt.thread_num, round, num_pround, R_INF.total_reads, (round == (asm_opt.number_of_round-1))?1:0, tot_b, tot_e);

-    // exit(1);
+    exit(1);

    // if (r_out) write_pt_index(ha_flt_tab, ha_idx, &R_INF, &asm_opt, asm_opt.output_file_name);
    if(des_idx) {