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trio-dual/bug for hic phasing

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chhylp123
2023-05-31 14:54:50 -04:00
parent 44475e2665
commit adeb2c603d
7 changed files with 259 additions and 6 deletions
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gfa_ut.h
+1
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@@ -40,5 +40,6 @@ void filter_sg_by_ug(asg_t *rg, ma_ug_t *ug, ug_opt_t *uopt);
void ug_ext_gfa(ug_opt_t *uopt, asg_t *sg, uint32_t max_len);
void update_sg_uo(asg_t *g, ma_hit_t_alloc *src);
uint32_t get_arcs(asg_t *g, uint32_t v, uint32_t* idx, uint32_t idx_n);
uint64_t ug_occ_w(uint64_t is, uint64_t ie, ma_utg_t *u);
#endif