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seperate purgeing and hom peak

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chhylp123
2021-07-25 11:23:06 -04:00
parent 6a043540b5
commit b14f894160
6 changed files with 87 additions and 22 deletions
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khashl.h
+12 -4
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@@ -136,25 +136,33 @@ static kh_inline khint_t __kh_h2b(khint_t hash, khint_t bits) { return hash * 26
#define __KHASHL_IMPL_S_L(SCOPE, HType, prefix, khkey_t) \
SCOPE khint_t prefix##_save(HType *h, FILE* fp) { \
if (!h) return 0; \
uint8_t ff; \
khint_t n_buckets = (h->keys? 1U<<h->bits : 0U); \
fwrite(&n_buckets, sizeof(n_buckets), 1, fp); \
fwrite(&h->bits, sizeof(h->bits), 1, fp); \
fwrite(&h->count, sizeof(h->count), 1, fp); \
fwrite(h->used, sizeof(khint32_t), __kh_fsize(n_buckets), fp); \
fwrite(h->keys, sizeof(khkey_t), n_buckets, fp); \
ff = h->used? 1:0; fwrite(&ff, sizeof(ff), 1, fp); \
if(ff) fwrite(h->used, sizeof(khint32_t), __kh_fsize(n_buckets), fp); \
ff = h->keys? 1:0; fwrite(&ff, sizeof(ff), 1, fp); \
if(ff) fwrite(h->keys, sizeof(khkey_t), n_buckets, fp); \
return 1; \
} \
SCOPE khint_t prefix##_load(HType **h, FILE* fp) { \
(*h) = prefix##_init(); \
khint_t n_buckets; \
uint64_t flag = 0;\
uint8_t ff; \
flag += fread(&n_buckets, sizeof(n_buckets), 1, fp); \
flag += fread(&(*h)->bits, sizeof((*h)->bits), 1, fp); \
flag += fread(&(*h)->count, sizeof((*h)->count), 1, fp); \
flag += fread(&ff, sizeof(ff), 1, fp); \
if(ff) {\
(*h)->used = (khint32_t*)kmalloc(__kh_fsize(n_buckets) * sizeof(khint32_t)); \
flag += fread((*h)->used, sizeof(khint32_t), __kh_fsize(n_buckets), fp); }\
flag += fread(&ff, sizeof(ff), 1, fp); \
if(ff) {\
(*h)->keys = (khkey_t*)kmalloc(n_buckets * sizeof(khkey_t)); \
flag += fread((*h)->used, sizeof(khint32_t), __kh_fsize(n_buckets), fp); \
flag += fread((*h)->keys, sizeof(khkey_t), n_buckets, fp); \
flag += fread((*h)->keys, sizeof(khkey_t), n_buckets, fp); }\
return 1; \
} \