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Haoyu Cheng
2019-07-01 09:08:25 -04:00
parent 30161f1544
commit b553f3ac5e
17 changed files with 732 additions and 18 deletions
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Hash_Table.h
+1 -3
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@@ -398,9 +398,7 @@ void clear_Heap(HeapSq* HBT);
void init_overlap_region_alloc(overlap_region_alloc* list);
void clear_overlap_region_alloc(overlap_region_alloc* list);
void destory_overlap_region_alloc(overlap_region_alloc* list);
void append_overlap_region_alloc(overlap_region_alloc* list,
uint64_t x_id, uint64_t x_pos_s, uint64_t x_pos_e, uint64_t x_pos_strand,
uint64_t y_id, uint64_t y_pos_s, uint64_t y_pos_e, uint64_t y_pos_strand);
void append_overlap_region_alloc(overlap_region_alloc* list, overlap_region* tmp, All_reads* R_INF);
void calculate_overlap_region(Candidates_list* candidates, overlap_region_alloc* overlap_list,
uint64_t readID, uint64_t readLength, All_reads* R_INF);