This commit is contained in:
Haoyu Cheng
2019-09-05 11:47:54 -04:00
parent d5327fe9ee
commit b57923d050
6 changed files with 876 additions and 137 deletions
+3
View File
@@ -17,6 +17,9 @@ typedef khash_t(POS64) Pos_Table;
///#define THRESHOLD 14
#define WINDOW 375
#define WINDOW_BOUNDARY 150
///for one side, the first or last WINDOW_UNCORRECT_SINGLE_SIDE_BOUNDARY bases should not be corrected
#define WINDOW_UNCORRECT_SINGLE_SIDE_BOUNDARY 25
#define THRESHOLD 15
#define THRESHOLD_RATE 0.04
#define OVERLAP_THRESHOLD 0.9