checkpoint for scaffolding

2026-09-15 12:47:57 +08:00 · 2023-09-15 12:58:34 -04:00
parent 858b95a3bb
commit c7685e6f19
8 changed files with 1735 additions and 98 deletions
--- a/CommandLines.cpp
+++ b/CommandLines.cpp
@@ -294,6 +294,7 @@ void init_opt(hifiasm_opt_t* asm_opt)
    asm_opt->ul_pst_join = 1;
    asm_opt->trio_cov_het_ovlp = -1;
    asm_opt->ul_min_base = 0;
+    asm_opt->self_scaf = 0;
 }

 void destory_enzyme(enzyme* f)