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add "n-weight"

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chhylp123
2021-04-24 00:03:36 -04:00
parent 7b07e355b7
commit c972c64b39
5 changed files with 71 additions and 27 deletions
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hifiasm.1
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@@ -332,14 +332,19 @@ File names of input Hi-C R1 [r1_1.fq,r1_2.fq,...].
.BI --h2 \ FILEs
File names of input Hi-C R2 [r2_1.fq,r2_2.fq,...].
.TP
.BI --n-weight \ INT
Rounds of reweighting Hi-C links [3]. Increasing this may improves
phasing results but takes longer time.
.TP
.BI --n-perturb \ INT
Rounds of perturbation [50000]. Increasing this improves
Rounds of perturbation [10000]. Increasing this may improves
phasing results but takes longer time.
.TP
.BI --f-perturb \ FLOAT
Fraction to flip for perturbation [0.1]. Increasing this improves
Fraction to flip for perturbation [0.1]. Increasing this may improves
phasing results but takes longer time.
.TP