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r235: clarified option -f

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Heng Li
2020-04-12 19:42:02 -04:00
parent cdd5f3e4e0
commit cc166c8ff5
3 changed files with 18 additions and 6 deletions
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hifiasm.1
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@@ -91,11 +91,23 @@ Show version number.
.SS Error correction options
.TP
.BI -k \ INT
K-mer length [40]. This option must be less than 64.
.TP 10
.BI -k \ INT
K-mer length [51]. This option must be less than 64.
.TP
.BI -w \ INT
Minimizer window size [51].
.TP
.BI -f \ INT
Number of bits for bloom filter; 0 to disable [37]. This bloom filter is used
to filter out singleton k-mers when counting all k-mers. It takes
.RI 2^( INT -3)
bytes of memory. A proper setting saves memory. 37 is recommended for human
assembly.
.TP
.BI -r \ INT
Rounds of haplotype-aware error corrections [2]. This option affects all outputs of hifiasm.