From cfb0a5c8ec817a8ad61182167c90cd964a9d8cdc Mon Sep 17 00:00:00 2001
From: Heng Li <lh3@me.com>
Date: Mon, 23 Mar 2020 09:54:42 -0400
Subject: [PATCH] reduced the position to 32 bits

---
 Hash_Table.h | 6 +++---
 Overlaps.cpp | 4 ++--
 2 files changed, 5 insertions(+), 5 deletions(-)

diff --git a/Hash_Table.h b/Hash_Table.h
index f1b997f..29f8827 100644
--- a/Hash_Table.h
+++ b/Hash_Table.h
@@ -55,8 +55,8 @@ typedef struct
 
 typedef struct
 {
-    uint64_t offset;
-    uint64_t readID;
+    uint32_t offset:31, rev:1;
+    uint32_t readID;
 } k_mer_pos;
 
 typedef struct
@@ -551,4 +551,4 @@ void destory_window_list_alloc(window_list_alloc* x);
 void resize_window_list_alloc(window_list_alloc* x, long long size);
 
 
-#endif
\ No newline at end of file
+#endif
diff --git a/Overlaps.cpp b/Overlaps.cpp
index c2deb22..72ab35e 100644
--- a/Overlaps.cpp
+++ b/Overlaps.cpp
@@ -11446,7 +11446,7 @@ void print_untig(ma_ug_t *g, uint32_t uId, const char* info, uint32_t is_print_r
     for (k = 0; k < u->n; k++)
     {
         fprintf(stderr, "%s: rId>>1: %lu, dir: %lu, name: %.*s\n", 
-        info, u->a[k]>>33, (u->a[k]>>32)&1, 
+        info, (unsigned long)(u->a[k]>>33), (unsigned long)((u->a[k]>>32)&1),
         (int)Get_NAME_LENGTH((R_INF), (u->a[k]>>33)), Get_NAME((R_INF), (u->a[k]>>33)));
     }
 }
@@ -24753,7 +24753,7 @@ void fix_binned_reads(ma_hit_t_alloc* paf, uint64_t n_read, ma_sub_t* coverage_c
     }
 
     fprintf(stderr, "n_read: %lu, binned_reads: %lu, binned_error_reads: %lu\n", 
-    n_read, binned_reads, binned_error_reads);
+    (unsigned long)n_read, (unsigned long)binned_reads, (unsigned long)binned_error_reads);
 }