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fixed bugs for trio-binning

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chhylp123
2020-05-17 11:53:12 -04:00
parent 7f6725ead3
commit d36e1e7782
4 changed files with 140 additions and 72 deletions
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1
Assembly.cpp
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@@ -1164,6 +1164,7 @@ int ha_assemble(void)
ovlp_loaded = 1;
fprintf(stderr, "[M::%s::%.3f*%.2f] ==> loaded corrected reads and overlaps from disk\n", __func__, yak_realtime(), yak_cpu_usage());
if (!(asm_opt.flag & HA_F_SKIP_TRIOBIN) && !(asm_opt.flag & HA_F_VERBOSE_GFA)) ha_triobin(&asm_opt);
///if (!(asm_opt.flag & HA_F_SKIP_TRIOBIN)) ha_triobin(&asm_opt);
if (asm_opt.flag & HA_F_WRITE_EC) Output_corrected_reads();
if (asm_opt.flag & HA_F_WRITE_PAF) Output_PAF();
}