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r852 -> hybrid correction

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chhylp123
2026-02-11 16:38:27 -05:00
parent ec9a8b222d
commit d6ba102d42
73 changed files with 190525 additions and 180074 deletions
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Output.h
+38 -38
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@@ -1,38 +1,38 @@
#ifndef __OUTPUT__
#define __OUTPUT__
#define __STDC_LIMIT_MACROS
#include<stdint.h>
#include <string.h>
#include <stdlib.h>
#include <zlib.h>
typedef struct
{
char* buffer;
long long size;
long long length;
} Output_buffer_sub_block;
typedef struct Output_buffer
{
Output_buffer_sub_block* sub_buffer;
long long sub_block_size;
long long sub_block_number;
int all_buffer_end;
} Output_buffer;
#define OUTPUT_BUFFER_SIZE 100
#define SUB_BLOCK_INIT_SIZE 10000
void init_buffer_sub_block(Output_buffer_sub_block* sub_block);
void* pop_buffer(void*);
void add_segment_to_sub_buffer(Output_buffer_sub_block* current_sub_buffer, char* seg, long long segLen);
void add_base_to_sub_buffer(Output_buffer_sub_block* current_sub_buffer, char base);
void push_results_to_buffer(Output_buffer_sub_block* sub_block);
void finish_output_buffer();
void destory_buffer_sub_block(Output_buffer_sub_block* sub_block);
void destory_output_buffer();
void init_output_buffer(int thread_number);
#endif
#ifndef __OUTPUT__
#define __OUTPUT__
#define __STDC_LIMIT_MACROS
#include<stdint.h>
#include <string.h>
#include <stdlib.h>
#include <zlib.h>
typedef struct
{
char* buffer;
long long size;
long long length;
} Output_buffer_sub_block;
typedef struct Output_buffer
{
Output_buffer_sub_block* sub_buffer;
long long sub_block_size;
long long sub_block_number;
int all_buffer_end;
} Output_buffer;
#define OUTPUT_BUFFER_SIZE 100
#define SUB_BLOCK_INIT_SIZE 10000
void init_buffer_sub_block(Output_buffer_sub_block* sub_block);
void* pop_buffer(void*);
void add_segment_to_sub_buffer(Output_buffer_sub_block* current_sub_buffer, char* seg, long long segLen);
void add_base_to_sub_buffer(Output_buffer_sub_block* current_sub_buffer, char base);
void push_results_to_buffer(Output_buffer_sub_block* sub_block);
void finish_output_buffer();
void destory_buffer_sub_block(Output_buffer_sub_block* sub_block);
void destory_output_buffer();
void init_output_buffer(int thread_number);
#endif