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@@ -31,10 +31,12 @@ typedef struct {
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char *fn_bin_list[2];
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char *extract_list;
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char *hic_files[2];
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char **hic_enzymes;
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int extract_iter;
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int thread_num;
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int k_mer_length;
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int hic_mer_length;
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int bub_mer_length;
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int mz_win;
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int bf_shift;
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double high_factor; // coverage cutoff set to high_factor*hom_cov
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