diff --git a/CommandLines.cpp b/CommandLines.cpp index 25cbd8c..08ca8ae 100644 --- a/CommandLines.cpp +++ b/CommandLines.cpp @@ -219,9 +219,9 @@ void Print_H(hifiasm_opt_t* asm_opt) fprintf(stderr, " --ont assemble ONT simplex reads in fastq format\n"); // fprintf(stderr, " --sc-n consider base qual value for assembly\n"); fprintf(stderr, " --chem-c INT\n"); - fprintf(stderr, " detect chemical reads with <=INT other reads support [%lu]\n", asm_opt->chemical_cov); + fprintf(stderr, " detect chimeric reads with <=INT other reads support [%lu]\n", asm_opt->chemical_cov); fprintf(stderr, " --chem-f INT\n"); - fprintf(stderr, " length of flanking regions for chemical read detection [%lu]\n", asm_opt->chemical_flank); + fprintf(stderr, " length of flanking regions for chimeric read detection [%lu]\n", asm_opt->chemical_flank); fprintf(stderr, "Example: ./hifiasm -o NA12878.asm -t 32 NA12878.fq.gz\n"); diff --git a/CommandLines.h b/CommandLines.h index 7cf00dc..7ab486e 100644 --- a/CommandLines.h +++ b/CommandLines.h @@ -5,7 +5,7 @@ #include #include -#define HA_VERSION "0.22.0-r687" +#define HA_VERSION "0.22.0-r689" #define VERBOSE 0