diff --git a/README.md b/README.md index b27d494..e0f745e 100644 --- a/README.md +++ b/README.md @@ -1,3 +1,9 @@ -# Long_read_assembly +## Getting Started -##test \ No newline at end of file +```sh +# Install hifiasm and miniasm (requiring g++ and zlib) +git clone https://github.com/chhylp123/hifiasm.git +cd hifiasm && make +# Assembly (corrected reads are at NA12878.asm.fa, assembly graph is at NA12878.asm.fa.gfa) +./hifiasm -w -l -q NA12878.fq.gz -o NA12878.asm.fa -k 40 -t 32 -r 2 -a 4 -z 0 +``` \ No newline at end of file