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0.16.0 release
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@@ -1,4 +1,4 @@
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.TH hifiasm 1 "25 July 2021" "hifiasm-0.15.5 (r350)" "Bioinformatics tools"
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.TH hifiasm 1 "22 August 2021" "hifiasm-0.16.0 (r369)" "Bioinformatics tools"
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.SH NAME
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.PP
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@@ -161,6 +161,19 @@ Some old Hifi reads may consist of
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short adapters (e.g., 20bp adapter at one end). For such data, trimming short adapters would
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significantly improve the assembly quality.
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.TP
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.BI --max-kocc \ INT
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Employ k-mers occurring <
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.IR INT
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times to rescue repetitive overlaps [2000].
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This option may improve the resolution of repeats.
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.TP
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.BI --hg-size \ INT (k/m/g)
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Estimated haploid genome size used for inferring read coverage [auto].
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This option is used to get accurate homozygous read coverage during
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error correction. Common suffices are required, for example, 100m or 3g.
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.TP
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.BI --min-hist-cnt \ INT
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When analyzing the k-mer spectrum, ignore counts below
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