From e5a8d0c1f554453b896156e7ef2123b3c6483629 Mon Sep 17 00:00:00 2001 From: chhylp123 Date: Tue, 2 Feb 2021 13:19:06 -0500 Subject: [PATCH] for -z --- Assembly.cpp | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/Assembly.cpp b/Assembly.cpp index 976d304..44f5a82 100644 --- a/Assembly.cpp +++ b/Assembly.cpp @@ -848,7 +848,7 @@ void ha_overlap_and_correct(int round) b[i] = ha_ovec_init(0, (round == asm_opt.number_of_round - 1)); if(ha_idx) hom_cov = asm_opt.hom_cov; if(ha_idx == NULL) ha_idx = ha_pt_gen(&asm_opt, ha_flt_tab, round == 0? 0 : 1, 0, &R_INF, &hom_cov, &het_cov); // build the index - debug_adapter(&asm_opt, &R_INF); + ///debug_adapter(&asm_opt, &R_INF); if (round == 0 && ha_flt_tab == 0) // then asm_opt.hom_cov hasn't been updated ha_opt_update_cov(&asm_opt, hom_cov); if (asm_opt.required_read_name)