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fixed duplicated chaining issue

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chhylp123
2022-05-03 17:35:43 -04:00
parent 8138941a26
commit e8399b18f1
7 changed files with 270 additions and 112 deletions
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Assembly.cpp
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@@ -21,7 +21,7 @@ void ha_sort_list_by_anchor(overlap_region_alloc *overlap_list);
All_reads R_INF;
Debug_reads R_INF_FLAG;
all_ul_t UL_INF;
all_ul_t UL_INF, ULG_INF;
uint32_t *het_cnt = NULL;
void get_corrected_read_from_cigar(Cigar_record* cigar, char* pre_read, int pre_length, char* new_read, int* new_length)