xxay/hifiasm
1
0
Fork 0
mirror of https://github.com/chhylp123/hifiasm.git synced 2026-10-07 02:48:12 +08:00
Code Issues Packages Projects Releases Wiki Activity

update ed

Browse Source
This commit is contained in:
chhylp123
2022-09-20 22:48:59 -04:00
parent 4e7bb7eeb9
commit f4cc895fa0
7 changed files with 1232 additions and 137 deletions
Download Patch File Download Diff File Expand all files Collapse all files
Correct.h
+5
View File
@@ -1132,6 +1132,11 @@ void correct_ul_overlap(overlap_region_alloc* overlap_list, const ul_idx_t *uref
int force_repeat, int is_consensus, int* fully_cov, int* abnormal,
double max_ov_diff_ec, long long winLen, void *km);
void ul_lalign(overlap_region_alloc* ol, Candidates_list *cl, const ul_idx_t *uref, char *qstr,
uint64_t ql, UC_Read* qu, UC_Read* tu, Correct_dumy* dumy, bit_extz_t *exz,
haplotype_evdience_alloc* hap, kvec_t_u64_warp* v_idx,
double e_rate, int64_t wl, uint64_t is_base, int64_t sid, void *km);
void ul_lalign_old_ed(overlap_region_alloc* ol, Candidates_list *cl, const ul_idx_t *uref, char *qstr,
uint64_t ql, UC_Read* qu, UC_Read* tu, Correct_dumy* dumy,
haplotype_evdience_alloc* hap, kvec_t_u64_warp* v_idx,
double e_rate, int64_t wl, uint64_t is_base, void *km);