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update ed

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chhylp123
2022-09-20 22:48:59 -04:00
parent 4e7bb7eeb9
commit f4cc895fa0
7 changed files with 1232 additions and 137 deletions
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main.cpp
+14 -7
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@@ -15,13 +15,19 @@ int main(int argc, char *argv[])
/**
bit_extz_t exz, exz64; init_bit_extz_t(&exz, 2); init_bit_extz_t(&exz64, 2);
char *pstr = "GTGTGG", *tsrt = "CTGT"; int32_t thre = 1;
ed_band_cal_semi_infi_w((char*)pstr, strlen(pstr), (char*)tsrt, strlen(tsrt), thre, NULL, &exz);
ed_band_cal_semi_64_w((char*)pstr, strlen(pstr), (char*)tsrt, strlen(tsrt), thre, &exz64);
fprintf(stderr, "\n[M::%s::] exz.err::%d, exz64.err::%d, exz.ps::%d, exz64.ps::%d, exz.pe::%d, exz64.pe::%d, exz.ts::%d, exz64.ts::%d, exz.te::%d, exz64.te::%d\n", __func__,
exz.err, exz64.err, exz.ps, exz64.ps, exz.pe, exz64.pe, exz.ts, exz64.ts, exz.te, exz64.te);
ed_band_cal_semi_64_w_trace((char*)pstr, strlen(pstr), (char*)tsrt, strlen(tsrt), thre, &exz64);
cigar_check((char*)pstr, (char*)tsrt, &(exz64));
char *pstr = "AAATATT", *tsrt = "AATATTTT"; int32_t thre = 1;
ed_band_cal_semi_64_w_absent_diag((char*)pstr, strlen(pstr), (char*)tsrt, strlen(tsrt), thre, 0, &exz);
fprintf(stderr, "\n[M::%s::] exz.err::%d, exz.ps::%d, exz.pe::%d, exz.ts::%d, exz.te::%d\n", __func__,
exz.err, exz.ps, exz.pe, exz.ts, exz.te);
ed_band_cal_extension_64_0_w((char*)pstr, strlen(pstr), (char*)tsrt, strlen(tsrt), thre, &exz);
fprintf(stderr, "\n[M::%s::] exz.err::%d, exz.ps::%d, exz.pe::%d, exz.ts::%d, exz.te::%d\n", __func__,
exz.err, exz.ps, exz.pe, exz.ts, exz.te);
// ed_band_cal_semi_infi_w((char*)pstr, strlen(pstr), (char*)tsrt, strlen(tsrt), thre, NULL, &exz);
// ed_band_cal_semi_64_w((char*)pstr, strlen(pstr), (char*)tsrt, strlen(tsrt), thre, &exz64);
// fprintf(stderr, "\n[M::%s::] exz.err::%d, exz64.err::%d, exz.ps::%d, exz64.ps::%d, exz.pe::%d, exz64.pe::%d, exz.ts::%d, exz64.ts::%d, exz.te::%d, exz64.te::%d\n", __func__,
// exz.err, exz64.err, exz.ps, exz64.ps, exz.pe, exz64.pe, exz.ts, exz64.ts, exz.te, exz64.te);
// ed_band_cal_semi_64_w_trace((char*)pstr, strlen(pstr), (char*)tsrt, strlen(tsrt), thre, &exz64);
// cigar_check((char*)pstr, (char*)tsrt, &(exz64));
// char *pstr = "TGT", *tsrt = "CTGT"; int32_t thre = 1;
@@ -44,6 +50,7 @@ int main(int argc, char *argv[])
exit(1);
**/
// fprintf(stderr, "[M::%s::] ed_global::%d, ed_global_128bit::%d\n", __func__,
// ed_band_cal_global((char *)"ACT", 3, (char *)"AAT", 3, 1),