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support HPC k-mer

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Heng Li
2020-03-24 19:58:21 -04:00
parent ec750cdd7d
commit f70257c260
3 changed files with 62 additions and 4 deletions
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CommandLines.cpp
+2
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@@ -66,6 +66,8 @@ void init_opt(hifiasm_opt_t* asm_opt)
asm_opt->thread_num = 1;
asm_opt->k_mer_length = 41;
asm_opt->bf_shift = 37;
asm_opt->high_factor = 10.0f;
asm_opt->no_HPC = 0;
asm_opt->k_mer_min_freq = 3;
asm_opt->k_mer_max_freq = 66;
asm_opt->load_index_from_disk = 1;