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update coverage

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chhylp123
2020-07-13 22:34:26 -04:00
parent c01b593d7c
commit fda858f9e7
8 changed files with 449 additions and 104 deletions
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2
Assembly.cpp
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@@ -1203,7 +1203,7 @@ int ha_assemble(void)
ha_extract_print_list(&R_INF, asm_opt.extract_iter, asm_opt.extract_list);
exit(0);
}
if (!(asm_opt.flag & HA_F_SKIP_TRIOBIN) && !(asm_opt.flag & HA_F_VERBOSE_GFA)) ha_triobin(&asm_opt), ovlp_loaded = 2;
if (!(asm_opt.flag & HA_F_SKIP_TRIOBIN) && !(asm_opt.flag & HA_F_VERBOSE_GFA)) ha_triobin(&asm_opt);
///if (!(asm_opt.flag & HA_F_SKIP_TRIOBIN)) ha_triobin(&asm_opt), ovlp_loaded = 2;
if (asm_opt.flag & HA_F_WRITE_EC) Output_corrected_reads();
if (asm_opt.flag & HA_F_WRITE_PAF) Output_PAF();