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update coverage
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@@ -1,4 +1,4 @@
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.TH hifiasm 1 "12 Apr 2020" "hifiasm-0.5.0" "Bioinformatics tools"
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.TH hifiasm 1 "27 June 2020" "hifiasm-0.8 (r279)" "Bioinformatics tools"
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.SH NAME
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.PP
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@@ -192,6 +192,12 @@ and do the assembly directly and quickly.
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This might be helpful when users want to get an optimized assembly by multiple rounds of experiments
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with different parameters.
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.TP
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.BI --pri-range \ INT,INT
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Min and max coverage cutoff of primary contigs.
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Keep contigs with coverage in this range at p_ctg.gfa.
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Inferred automatically in default.
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Set -1,-1 to disable
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.SS Trio-partition options
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@@ -252,6 +258,11 @@ Similarity threshold for duplicate haplotigs that should be purged [0.75].
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.BI -O \ FLOAT
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Min number of overlapped reads for duplicate haplotigs that should be purged [1].
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.TP
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.BI --purge-cov \ INT
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Coverage upper bound of Purge-dups, which is inferred automatically in default.
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If the coverage of a contig is higher than this bound, don't apply Purge-dups.
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.SS Debugging options
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.TP 10
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