mirror of
https://github.com/chhylp123/hifiasm.git
synced 2026-09-15 12:47:57 +08:00
27 lines
562 B
C
27 lines
562 B
C
#ifndef __COMMAND_LINE_PARSER__
|
|
#define __COMMAND_LINE_PARSER__
|
|
|
|
#include <pthread.h>
|
|
|
|
|
|
extern char* read_file_name;
|
|
extern char* output_file_name;
|
|
extern int thread_num;
|
|
extern int k_mer_length;
|
|
extern int k_mer_min_freq;
|
|
extern int k_mer_max_freq;
|
|
extern int load_index_from_disk;
|
|
extern int write_index_to_disk;
|
|
extern int number_of_round;
|
|
extern int roundID;
|
|
extern int coverage;
|
|
extern int read_graph;
|
|
extern int c_round;
|
|
extern char* required_read_name;
|
|
extern int adapterLen;
|
|
|
|
|
|
int CommandLine_process (int argc, char *argv[]);
|
|
double Get_T(void);
|
|
|
|
#endif |