mirror of
https://github.com/chhylp123/hifiasm.git
synced 2026-09-16 05:07:55 +08:00
28 lines
874 B
C++
28 lines
874 B
C++
#include <stdio.h>
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#include <stdlib.h>
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#include "CommandLines.h"
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#include "Process_Read.h"
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#include "Assembly.h"
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#include "Levenshtein_distance.h"
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#include "htab.h"
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int main(int argc, char *argv[])
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{
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int i;
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init_opt(&asm_opt);
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if (!CommandLine_process(argc, argv, &asm_opt)) return 1;
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yak_reset_realtime();
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if (!asm_opt.no_kmer_flt)
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ha_flt_tab = ha_ft_gen(&asm_opt, &R_INF);
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Correct_Reads(asm_opt.number_of_round);
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ha_ft_destroy(ha_flt_tab);
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destory_All_reads(&R_INF);
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destory_opt(&asm_opt);
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fprintf(stderr, "[M::%s] Version: %s\n", __func__, HA_VERSION);
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fprintf(stderr, "[M::%s] CMD:", __func__);
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for (i = 0; i < argc; ++i)
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fprintf(stderr, " %s", argv[i]);
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fprintf(stderr, "\n[M::%s] Real time: %.3f sec; CPU: %.3f sec; Peak RSS: %.3f GB\n", __func__, yak_realtime(), yak_cputime(), yak_peakrss() / 1024.0 / 1024.0 / 1024.0);
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return 0;
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}
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