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13 lines
400 B
C
13 lines
400 B
C
#ifndef __INTER__
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#define __INTER__
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#include "Overlaps.h"
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#include "Process_Read.h"
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void ul_resolve(ma_ug_t *ug, const asg_t *rg, const ug_opt_t *uopt, int hap_n);
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void ul_load(const ug_opt_t *uopt);
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uint64_t* get_hifi2ul_list(all_ul_t *x, uint64_t hid, uint64_t* a_n);
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uint64_t ul_refine_alignment(const ug_opt_t *uopt, asg_t *sg);
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ma_ug_t *ul_realignment(const ug_opt_t *uopt, asg_t *sg);
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#endif
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