Prepare for 0.3.12 release

Changelog.md

@@ -1,3 +1,11 @@
+# 0.3.12
+
+* #81 List gene set annotations when cell annotations not present
+* #86 Upgrade pip within docker image
+* #73 Moved new link to front
+* #87 Temporarily pin versions of werkzeug and flask
+
+
 # 0.3.11
 
 * #81 added support for gene sets

cellxgene_gateway/__init__.py

@@ -7,4 +7,4 @@
 # OR CONDITIONS OF ANY KIND, either express or implied. See the License for
 # the specific language governing permissions and limitations under the License.
 
-__version__ = "0.3.11"
+__version__ = "0.3.12"

cellxgene_gateway/subprocess_backend.py

@@ -14,11 +14,7 @@ from flask_api import status
 
 from cellxgene_gateway.cache_entry import CacheEntryStatus
 from cellxgene_gateway.dir_util import make_annotations
-from cellxgene_gateway.env import (
+from cellxgene_gateway.env import cellxgene_args, enable_annotations, enable_backed_mode
-    cellxgene_args,
-    enable_annotations,
-    enable_backed_mode,
-)
 from cellxgene_gateway.process_exception import ProcessException
 
 logger = logging.getLogger(__name__)

environment.yml

@@ -4,7 +4,7 @@ channels:
 dependencies:
 - python=3.9
 - requests
-- flask==2.2.2
+- flask==2.2.5
 - psutil
 - black
 - twine
@@ -14,5 +14,5 @@ dependencies:
 - pip:
   - pre_commit
   - flask-api
-  - werkzeug==2.3.0
+  - werkzeug==2.3.8
   - cellxgene