fork/cellxgene-gateway
1
0
Fork 0
mirror of https://github.com/Novartis/cellxgene-gateway.git synced 2026-09-15 12:47:59 +08:00
Code Issues Packages Projects Releases Wiki Activity
64 Commits 17 Branches 22 Tags
feature/autoenv
Commit Graph

64 Commits

This Branch
This Branch
All Branches
Author SHA1 Message Date
Alok Saldanha
3cb521259e renaming environment.yml for nice conda autoenv behavior 2020-04-13 17:32:16 -04:00
Alok Saldanha
11bbc1aba8 pin cellxgene version 2020-03-30 18:42:43 -04:00
Alok Saldanha
186ccde277 misnamed key in process_exception.py 2020-03-30 18:37:29 -04:00
Alok Saldanha
2b65c095a6 updated import to reflect change in werkzeug api 2020-03-23 03:49:20 -04:00
Alokito
bae42edd3f Merge pull request #17 from Novartis/annotations 
Support for Annotations
 2020-01-29 07:54:15 -05:00
Alok Saldanha
cc09ac3b95 #14 fixed links in folder listings 2020-01-18 08:06:38 -05:00
Alok Saldanha
96ac41d860 #14 remove random characters from suffix 2020-01-18 08:00:19 -05:00
Alok Saldanha
525a9691c3 #14 fix bug in pruning code 2020-01-18 07:57:52 -05:00
Alok Saldanha
9f1d217e50 #14 properly use the external protocol in 302 redirects 2020-01-08 03:32:06 -05:00
Alok Saldanha
6c611f55dd #14 redirect prior to returning loading screen 2020-01-07 10:07:46 -05:00
Alok Saldanha
11efd3a954 #14 update links for opening and terminating datasets 2020-01-05 20:13:47 -05:00
Alok Saldanha
201f876341 #14 added custom method to create data dirs 2020-01-01 01:24:18 -05:00
Alok Saldanha
736541c4ec #14 Added support for listing files with _ or - as separator 2019-12-28 22:18:54 -05:00
Alok Saldanha
c03098af17 #14 enabled new annotations 
Due to issue with opening annotation files with "-" in the name, this doesn't quite work.
 2019-12-28 21:55:43 -05:00
Alok Saldanha
f41db75a24 #15 added intermediate index pages 2019-12-21 11:57:35 -05:00
Alok Saldanha
876263c046 #13 refresh page if more than five dots 2019-11-28 15:54:42 -05:00
Alok Saldanha
9532375eb0 #12 introduce GATEWAY_PORT, rename GATEWAY_HOST and GATEWAY_PROTOCOL to EXTERNAL_HOST and EXTERNAL_PROTOCOL 
Keep GATEWAY_HOST and GATEWAY_PROTOCOL for backwards compatibility (for now)
 2019-11-17 19:03:47 -05:00
Alok Saldanha
91c9607808 #9 fix race condition by grabbing lock before adding cache entry 2019-10-29 21:19:50 -04:00
Alok Saldanha
66f7a6b5a7 #9 properly terminate all child processes 2019-10-29 21:19:18 -04:00
Alok Saldanha
455e0cd087 #9 skip ports that are in use 2019-10-29 21:18:42 -04:00
Alok Saldanha
c937f90779 #8 added endpoint to return status json 2019-10-20 21:08:23 -04:00
Alok Saldanha
464ee87305 #7 added link to terminate loaded dataset 2019-10-20 20:53:38 -04:00
Alok Saldanha
2f2541d2b1 #6 added info output of env 
improved logging config
 2019-09-23 15:15:44 -04:00
Alok Saldanha
d3a290a3ab #6 add GATEWAY_ENABLE_UPLOAD environment variable 
routes that modify disk are not added unless the env variable is set.
 2019-09-23 14:48:58 -04:00
Alok Saldanha
876538cd52 #5 fixed missing slash in path joining 2019-09-19 13:09:38 -04:00
Alok Saldanha
6656de6214 #5 added failing test for path combination in render_entry 2019-09-19 13:01:08 -04:00
Alok Saldanha
6cf953aaab #5 added os.path.join to flask routes 
Also added a subdir check for security.
 2019-09-19 12:54:26 -04:00
Alok Saldanha
b5158dee47 GH-4 properly reference cache.prune 
also added logging
 2019-09-19 12:04:43 -04:00
Alok Saldanha
f6d10946c6 #4 added failing test for cache pruning 2019-09-19 12:02:24 -04:00
Alok Saldanha
c4828d8be5 #3 added downgrade warning 2019-09-18 11:55:05 -04:00
Alok Saldanha
03e04d553f #3 fixed case of Readme.md in setup.py 2019-09-18 11:45:15 -04:00
Alok Saldanha
0b267725ba #2 replace print() with logging 2019-09-17 13:08:30 -04:00
Alok Saldanha
5c41dbb18d #2 remove missing property 2019-09-17 11:35:25 -04:00
Alok Saldanha
820314adff #2 blackened 2019-09-17 11:06:50 -04:00
Alok Saldanha
f7f49b3568 #2 added link to relaunch server on process error page 2019-09-17 11:05:22 -04:00
Alok Saldanha
a6d80c1926 #2 added link to view status of currently loaded datasets 2019-09-17 10:16:52 -04:00
Alok Saldanha
2b259ab6b5 #2 added a way to relaunch a cellxgene server 2019-09-17 10:13:20 -04:00
Alok Saldanha
a6c9456786 added support for gateway ttl and manual pruning 2019-09-16 17:12:29 -04:00
Alok Saldanha
90d5d8b570 removed unnecessary selection 2019-09-16 16:03:08 -04:00
Alokito
af8169607d added section on reaching out to @alokito 2019-09-16 14:59:30 -04:00
Alok Saldanha
1b053092b4 added cache status 2019-09-16 13:40:50 -04:00
Alok Saldanha
1e1de19878 added unit test 2019-09-16 10:58:02 -04:00
Alok Saldanha
15998beb68 added support for GATEWAY_EXTRA_SCRIPTS 2019-09-16 10:32:35 -04:00
Alok Saldanha
6183a7ed7d streamlined normal example, readme docs 2019-09-07 07:36:48 -04:00
Alokito
20bffbfcc4 clarified parallel options 2019-09-06 14:55:49 -04:00
Alokito
74fbd7a295 separated installing and running Cellxgene Gateway 2019-09-06 14:55:00 -04:00
Alokito
b2450960a9 Typo in setup.py 2019-09-06 14:36:39 -04:00
Alokito
90eb717a7f Updated package_data 2019-09-06 14:34:48 -04:00
Alokito
e142c62513 separated different ways of running locally 2019-09-06 14:26:00 -04:00
Alokito
ec0bf625fc Merge pull request #1 from ericmjl/conda 
Package-ified
 2019-09-06 14:10:48 -04:00