Commit Graph
78 Commits
Author SHA1 Message Date
Alokito 021d981bef Create travis.yml 2020-08-10 16:52:32 -04:00
Alok Saldanha df812f3203 ignore patch files v0.2.0 2020-06-11 13:44:10 -04:00
Alok Saldanha 804ea29f36 move version string into module 2020-06-11 13:43:06 -04:00
Alok Saldanha da99abdd9f Increment version to 0.2.0 2020-06-11 10:53:14 -04:00
Alok Saldanha bf221309d8 Merge branch for 0.1.0 release into master 2020-06-11 10:47:43 -04:00
Alok Saldanha 3c53a8a4e6 added setup.cfg v0.1.0 2020-06-11 09:58:16 -04:00
Alok Saldanha 3ea5c29265 Added missing license notifications 2020-06-11 09:58:16 -04:00
Alok Saldanha 64d1799133 spruce up setup.py
Mark version 0.1.0
Add python_requires
add long_description
2020-06-11 09:58:16 -04:00
Alok Saldanha de8dfb0a39 rename LICENSE.txt => LICENSE 2020-06-11 09:58:15 -04:00
Alok Saldanha 50d71e5bda rename Readme.md to README.md 2020-06-11 09:58:05 -04:00
Alokito 7c7fa5f12a Use all_entries in cellxgene_gateway/filecrawl.py 2020-05-17 14:57:20 -04:00
Gervaise H. Henry eb4693f1fa Sort os.listdir in filecrawler.py 2020-05-17 14:57:20 -04:00
Alok Saldanha 84db11077a bump version, update environment.yml 2020-05-06 17:17:09 -04:00
Alokito f8e619c53e Merge pull request #18 from fidelram/enable_backed_mode
updated annot arguments for cellxgene v 0.15 & added option for backed mode.
2020-05-06 17:16:22 -04:00
Fidel Ramírez 9a130a8eb7 updated arguments for cellxgene v 0.15. Added option for backed mode. 2020-05-04 13:49:09 +02:00
Alok Saldanha 11bbc1aba8 pin cellxgene version 2020-03-30 18:42:43 -04:00
Alok Saldanha 186ccde277 misnamed key in process_exception.py 2020-03-30 18:37:29 -04:00
Alok Saldanha 2b65c095a6 updated import to reflect change in werkzeug api 2020-03-23 03:49:20 -04:00
Alokito bae42edd3f Merge pull request #17 from Novartis/annotations
Support for Annotations
2020-01-29 07:54:15 -05:00
Alok Saldanha cc09ac3b95 #14 fixed links in folder listings 2020-01-18 08:06:38 -05:00
Alok Saldanha 96ac41d860 #14 remove random characters from suffix 2020-01-18 08:00:19 -05:00
Alok Saldanha 525a9691c3 #14 fix bug in pruning code 2020-01-18 07:57:52 -05:00
Alok Saldanha 9f1d217e50 #14 properly use the external protocol in 302 redirects 2020-01-08 03:32:06 -05:00
Alok Saldanha 6c611f55dd #14 redirect prior to returning loading screen 2020-01-07 10:07:46 -05:00
Alok Saldanha 11efd3a954 #14 update links for opening and terminating datasets 2020-01-05 20:13:47 -05:00
Alok Saldanha 201f876341 #14 added custom method to create data dirs 2020-01-01 01:24:18 -05:00
Alok Saldanha 736541c4ec #14 Added support for listing files with _ or - as separator 2019-12-28 22:18:54 -05:00
Alok Saldanha c03098af17 #14 enabled new annotations
Due to issue with opening annotation files with "-" in the name, this doesn't quite work.
2019-12-28 21:55:43 -05:00
Alok Saldanha f41db75a24 #15 added intermediate index pages 2019-12-21 11:57:35 -05:00
Alok Saldanha 876263c046 #13 refresh page if more than five dots 2019-11-28 15:54:42 -05:00
Alok Saldanha 9532375eb0 #12 introduce GATEWAY_PORT, rename GATEWAY_HOST and GATEWAY_PROTOCOL to EXTERNAL_HOST and EXTERNAL_PROTOCOL
Keep GATEWAY_HOST and GATEWAY_PROTOCOL for backwards compatibility (for now)
2019-11-17 19:03:47 -05:00
Alok Saldanha 91c9607808 #9 fix race condition by grabbing lock before adding cache entry 2019-10-29 21:19:50 -04:00
Alok Saldanha 66f7a6b5a7 #9 properly terminate all child processes 2019-10-29 21:19:18 -04:00
Alok Saldanha 455e0cd087 #9 skip ports that are in use 2019-10-29 21:18:42 -04:00
Alok Saldanha c937f90779 #8 added endpoint to return status json 2019-10-20 21:08:23 -04:00
Alok Saldanha 464ee87305 #7 added link to terminate loaded dataset 2019-10-20 20:53:38 -04:00
Alok Saldanha 2f2541d2b1 #6 added info output of env
improved logging config
2019-09-23 15:15:44 -04:00
Alok Saldanha d3a290a3ab #6 add GATEWAY_ENABLE_UPLOAD environment variable
routes that modify disk are not added unless the env variable is set.
2019-09-23 14:48:58 -04:00
Alok Saldanha 876538cd52 #5 fixed missing slash in path joining 2019-09-19 13:09:38 -04:00
Alok Saldanha 6656de6214 #5 added failing test for path combination in render_entry 2019-09-19 13:01:08 -04:00
Alok Saldanha 6cf953aaab #5 added os.path.join to flask routes
Also added a subdir check for security.
2019-09-19 12:54:26 -04:00
Alok Saldanha b5158dee47 GH-4 properly reference cache.prune
also added logging
2019-09-19 12:04:43 -04:00
Alok Saldanha f6d10946c6 #4 added failing test for cache pruning 2019-09-19 12:02:24 -04:00
Alok Saldanha c4828d8be5 #3 added downgrade warning 2019-09-18 11:55:05 -04:00
Alok Saldanha 03e04d553f #3 fixed case of Readme.md in setup.py 2019-09-18 11:45:15 -04:00
Alok Saldanha 0b267725ba #2 replace print() with logging 2019-09-17 13:08:30 -04:00
Alok Saldanha 5c41dbb18d #2 remove missing property 2019-09-17 11:35:25 -04:00
Alok Saldanha 820314adff #2 blackened 2019-09-17 11:06:50 -04:00
Alok Saldanha f7f49b3568 #2 added link to relaunch server on process error page 2019-09-17 11:05:22 -04:00
Alok Saldanha a6d80c1926 #2 added link to view status of currently loaded datasets 2019-09-17 10:16:52 -04:00