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Author SHA1 Message Date
Alok Saldanha
4e367b0ec9 update travis.yml to new conda env 2020-08-30 13:53:57 -04:00
Alok Saldanha
ce3eb0eedf Merge branch 'gmerge' into gmaster 
# Conflicts:
#	cellxgene_gateway/backend_cache.py
#	cellxgene_gateway/cache_entry.py
#	cellxgene_gateway/env.py
#	cellxgene_gateway/gateway.py
#	cellxgene_gateway/subprocess_backend.py
#	tests/test_cache_entry.py
#	tests/test_dir_util.py
 2020-08-30 13:47:22 -04:00
Alok Saldanha
9219336356 blackened code 2020-08-30 13:38:35 -04:00
Alok Saldanha
b689357f29 Applied "Formatting and new enumeration for Cellxgene-gateway" patch 2020-08-30 13:36:39 -04:00
Alok Saldanha
5349df36e8 prepared for 0.2.1 release 
updated docs
made GATEWAY_IP optional
v0.2.1 		2020-08-18 20:02:24 -04:00
Alokito
13802b72b9 Merge pull request #26 from Novartis/feature/25 
#25 added CELLXGENE_ARGS environment variable
 2020-08-18 19:45:31 -04:00
Alok Saldanha
0f8092e07a #25 added CELLXGENE_ARGS environment variable 2020-08-16 17:08:06 -04:00
Alok Saldanha
61c7c43da7 blackened code 2020-08-16 17:07:23 -04:00
Alokito
0604a0ca9f Merge pull request #27 from Novartis/feature/24 
Feature/24
 2020-08-16 17:05:49 -04:00
Alok Saldanha
8cdd23a57b #24 switched to absolute paths 
relative paths won't necessarily work in css files
 2020-08-16 16:17:28 -04:00
Alok Saldanha
486206bd32 #24 make static paths relative 2020-08-16 16:06:34 -04:00
Alokito
4105fc32e1 Update README.md 
added link to travis badge
 2020-08-10 20:06:31 -04:00
Alok Saldanha
59cdac5f85 move black into environment.yml 2020-08-10 18:01:22 -04:00
Alokito
bd1b7e8da2 Merge pull request #23 from Novartis/feature/22_metadata_api 
Feature/22 metadata api
 2020-08-10 17:57:50 -04:00
Alok Saldanha
bfa80f7ef8 #22 blackened code 2020-08-10 17:56:32 -04:00
Alok Saldanha
63cdfe1953 #22 fixed failing tests 2020-08-10 17:56:24 -04:00
Alok Saldanha
578845b133 #22 Added /metadata/ip_address endpoint 2020-08-10 17:49:03 -04:00
Alokito
849c8a58f2 Rename travis.yml to .travis.yml 2020-08-10 16:54:44 -04:00
Alokito
021d981bef Create travis.yml 2020-08-10 16:52:32 -04:00
Alok Saldanha
df812f3203 ignore patch files v0.2.0 2020-06-11 13:44:10 -04:00
Alok Saldanha
804ea29f36 move version string into module 2020-06-11 13:43:06 -04:00
Alok Saldanha
da99abdd9f Increment version to 0.2.0 2020-06-11 10:53:14 -04:00
Alok Saldanha
bf221309d8 Merge branch for 0.1.0 release into master 2020-06-11 10:47:43 -04:00
Alok Saldanha
3c53a8a4e6 added setup.cfg v0.1.0 2020-06-11 09:58:16 -04:00
Alok Saldanha
3ea5c29265 Added missing license notifications 2020-06-11 09:58:16 -04:00
Alok Saldanha
64d1799133 spruce up setup.py 
Mark version 0.1.0
Add python_requires
add long_description
 2020-06-11 09:58:16 -04:00
Alok Saldanha
de8dfb0a39 rename LICENSE.txt => LICENSE 2020-06-11 09:58:15 -04:00
Alok Saldanha
50d71e5bda rename Readme.md to README.md 2020-06-11 09:58:05 -04:00
Alokito
7c7fa5f12a Use all_entries in cellxgene_gateway/filecrawl.py 2020-05-17 14:57:20 -04:00
Gervaise H. Henry
eb4693f1fa Sort os.listdir in filecrawler.py 2020-05-17 14:57:20 -04:00
Alok Saldanha
84db11077a bump version, update environment.yml 2020-05-06 17:17:09 -04:00
Alokito
f8e619c53e Merge pull request #18 from fidelram/enable_backed_mode 
updated annot arguments for cellxgene v 0.15 & added option for backed mode.
 2020-05-06 17:16:22 -04:00
Fidel Ramírez
9a130a8eb7 updated arguments for cellxgene v 0.15. Added option for backed mode. 2020-05-04 13:49:09 +02:00
Alok Saldanha
11bbc1aba8 pin cellxgene version 2020-03-30 18:42:43 -04:00
Alok Saldanha
186ccde277 misnamed key in process_exception.py 2020-03-30 18:37:29 -04:00
Alok Saldanha
2b65c095a6 updated import to reflect change in werkzeug api 2020-03-23 03:49:20 -04:00
Alokito
bae42edd3f Merge pull request #17 from Novartis/annotations 
Support for Annotations
 2020-01-29 07:54:15 -05:00
Alok Saldanha
cc09ac3b95 #14 fixed links in folder listings 2020-01-18 08:06:38 -05:00
Alok Saldanha
96ac41d860 #14 remove random characters from suffix 2020-01-18 08:00:19 -05:00
Alok Saldanha
525a9691c3 #14 fix bug in pruning code 2020-01-18 07:57:52 -05:00
Alok Saldanha
9f1d217e50 #14 properly use the external protocol in 302 redirects 2020-01-08 03:32:06 -05:00
Alok Saldanha
6c611f55dd #14 redirect prior to returning loading screen 2020-01-07 10:07:46 -05:00
Alok Saldanha
11efd3a954 #14 update links for opening and terminating datasets 2020-01-05 20:13:47 -05:00
Alok Saldanha
201f876341 #14 added custom method to create data dirs 2020-01-01 01:24:18 -05:00
Alok Saldanha
736541c4ec #14 Added support for listing files with _ or - as separator 2019-12-28 22:18:54 -05:00
Alok Saldanha
c03098af17 #14 enabled new annotations 
Due to issue with opening annotation files with "-" in the name, this doesn't quite work.
 2019-12-28 21:55:43 -05:00
Alok Saldanha
f41db75a24 #15 added intermediate index pages 2019-12-21 11:57:35 -05:00
Alok Saldanha
876263c046 #13 refresh page if more than five dots 2019-11-28 15:54:42 -05:00
Alok Saldanha
9532375eb0 #12 introduce GATEWAY_PORT, rename GATEWAY_HOST and GATEWAY_PROTOCOL to EXTERNAL_HOST and EXTERNAL_PROTOCOL 
Keep GATEWAY_HOST and GATEWAY_PROTOCOL for backwards compatibility (for now)
 2019-11-17 19:03:47 -05:00
Alok Saldanha
91c9607808 #9 fix race condition by grabbing lock before adding cache entry 2019-10-29 21:19:50 -04:00