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83 Commits 17 Branches 22 Tags
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Author SHA1 Message Date
Alokito
bd1b7e8da2 Merge pull request #23 from Novartis/feature/22_metadata_api 
Feature/22 metadata api
 2020-08-10 17:57:50 -04:00
Alok Saldanha
bfa80f7ef8 #22 blackened code 2020-08-10 17:56:32 -04:00
Alok Saldanha
63cdfe1953 #22 fixed failing tests 2020-08-10 17:56:24 -04:00
Alok Saldanha
578845b133 #22 Added /metadata/ip_address endpoint 2020-08-10 17:49:03 -04:00
Alokito
849c8a58f2 Rename travis.yml to .travis.yml 2020-08-10 16:54:44 -04:00
Alokito
021d981bef Create travis.yml 2020-08-10 16:52:32 -04:00
Alok Saldanha
df812f3203 ignore patch files v0.2.0 2020-06-11 13:44:10 -04:00
Alok Saldanha
804ea29f36 move version string into module 2020-06-11 13:43:06 -04:00
Alok Saldanha
da99abdd9f Increment version to 0.2.0 2020-06-11 10:53:14 -04:00
Alok Saldanha
bf221309d8 Merge branch for 0.1.0 release into master 2020-06-11 10:47:43 -04:00
Alok Saldanha
3c53a8a4e6 added setup.cfg v0.1.0 2020-06-11 09:58:16 -04:00
Alok Saldanha
3ea5c29265 Added missing license notifications 2020-06-11 09:58:16 -04:00
Alok Saldanha
64d1799133 spruce up setup.py 
Mark version 0.1.0
Add python_requires
add long_description
 2020-06-11 09:58:16 -04:00
Alok Saldanha
de8dfb0a39 rename LICENSE.txt => LICENSE 2020-06-11 09:58:15 -04:00
Alok Saldanha
50d71e5bda rename Readme.md to README.md 2020-06-11 09:58:05 -04:00
Alokito
7c7fa5f12a Use all_entries in cellxgene_gateway/filecrawl.py 2020-05-17 14:57:20 -04:00
Gervaise H. Henry
eb4693f1fa Sort os.listdir in filecrawler.py 2020-05-17 14:57:20 -04:00
Alok Saldanha
84db11077a bump version, update environment.yml 2020-05-06 17:17:09 -04:00
Alokito
f8e619c53e Merge pull request #18 from fidelram/enable_backed_mode 
updated annot arguments for cellxgene v 0.15 & added option for backed mode.
 2020-05-06 17:16:22 -04:00
Fidel Ramírez
9a130a8eb7 updated arguments for cellxgene v 0.15. Added option for backed mode. 2020-05-04 13:49:09 +02:00
Alok Saldanha
11bbc1aba8 pin cellxgene version 2020-03-30 18:42:43 -04:00
Alok Saldanha
186ccde277 misnamed key in process_exception.py 2020-03-30 18:37:29 -04:00
Alok Saldanha
2b65c095a6 updated import to reflect change in werkzeug api 2020-03-23 03:49:20 -04:00
Alokito
bae42edd3f Merge pull request #17 from Novartis/annotations 
Support for Annotations
 2020-01-29 07:54:15 -05:00
Alok Saldanha
cc09ac3b95 #14 fixed links in folder listings 2020-01-18 08:06:38 -05:00
Alok Saldanha
96ac41d860 #14 remove random characters from suffix 2020-01-18 08:00:19 -05:00
Alok Saldanha
525a9691c3 #14 fix bug in pruning code 2020-01-18 07:57:52 -05:00
Alok Saldanha
9f1d217e50 #14 properly use the external protocol in 302 redirects 2020-01-08 03:32:06 -05:00
Alok Saldanha
6c611f55dd #14 redirect prior to returning loading screen 2020-01-07 10:07:46 -05:00
Alok Saldanha
11efd3a954 #14 update links for opening and terminating datasets 2020-01-05 20:13:47 -05:00
Alok Saldanha
201f876341 #14 added custom method to create data dirs 2020-01-01 01:24:18 -05:00
Alok Saldanha
736541c4ec #14 Added support for listing files with _ or - as separator 2019-12-28 22:18:54 -05:00
Alok Saldanha
c03098af17 #14 enabled new annotations 
Due to issue with opening annotation files with "-" in the name, this doesn't quite work.
 2019-12-28 21:55:43 -05:00
Alok Saldanha
f41db75a24 #15 added intermediate index pages 2019-12-21 11:57:35 -05:00
Alok Saldanha
876263c046 #13 refresh page if more than five dots 2019-11-28 15:54:42 -05:00
Alok Saldanha
9532375eb0 #12 introduce GATEWAY_PORT, rename GATEWAY_HOST and GATEWAY_PROTOCOL to EXTERNAL_HOST and EXTERNAL_PROTOCOL 
Keep GATEWAY_HOST and GATEWAY_PROTOCOL for backwards compatibility (for now)
 2019-11-17 19:03:47 -05:00
Alok Saldanha
91c9607808 #9 fix race condition by grabbing lock before adding cache entry 2019-10-29 21:19:50 -04:00
Alok Saldanha
66f7a6b5a7 #9 properly terminate all child processes 2019-10-29 21:19:18 -04:00
Alok Saldanha
455e0cd087 #9 skip ports that are in use 2019-10-29 21:18:42 -04:00
Alok Saldanha
c937f90779 #8 added endpoint to return status json 2019-10-20 21:08:23 -04:00
Alok Saldanha
464ee87305 #7 added link to terminate loaded dataset 2019-10-20 20:53:38 -04:00
Alok Saldanha
2f2541d2b1 #6 added info output of env 
improved logging config
 2019-09-23 15:15:44 -04:00
Alok Saldanha
d3a290a3ab #6 add GATEWAY_ENABLE_UPLOAD environment variable 
routes that modify disk are not added unless the env variable is set.
 2019-09-23 14:48:58 -04:00
Alok Saldanha
876538cd52 #5 fixed missing slash in path joining 2019-09-19 13:09:38 -04:00
Alok Saldanha
6656de6214 #5 added failing test for path combination in render_entry 2019-09-19 13:01:08 -04:00
Alok Saldanha
6cf953aaab #5 added os.path.join to flask routes 
Also added a subdir check for security.
 2019-09-19 12:54:26 -04:00
Alok Saldanha
b5158dee47 GH-4 properly reference cache.prune 
also added logging
 2019-09-19 12:04:43 -04:00
Alok Saldanha
f6d10946c6 #4 added failing test for cache pruning 2019-09-19 12:02:24 -04:00
Alok Saldanha
c4828d8be5 #3 added downgrade warning 2019-09-18 11:55:05 -04:00
Alok Saldanha
03e04d553f #3 fixed case of Readme.md in setup.py 2019-09-18 11:45:15 -04:00