Added @typescript-eslint/recommended config with suppressions (#2345)

* Disabled @blueprintjs/classes-constants. #2288.

* thuang-eslint-bp-off (#2344)

* Disabled @blueprintjs/classes-constants on webpack dev and shared. #2288.

* Added TS recommended, suppress lint errors codemod.

* Added per-error/warning ignore for tests.

* Added per-error/warning ignore for configuration.

* Added per-error/warning ignore for src. Removed suppress package.

* Minor linting.

Co-authored-by: Timmy Huang <tihuan@users.noreply.github.com>

client/__tests__/util/annoMatrix/annoMatrix.test.ts

@@ -14,9 +14,11 @@ import { Dataframe } from "../../../src/util/dataframe";
 enableFetchMocks();
 
 describe("AnnoMatrix", () => {
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   let annoMatrix: any;
 
   beforeEach(async () => {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     (fetch as any).resetMocks(); // reset all fetch mocking state
     // reset all fetch mocking state
     annoMatrix = new AnnoMatrixLoader(
@@ -37,6 +39,7 @@ describe("AnnoMatrix", () => {
     });
 
     test("simple single column fetch", async () => {
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).once(serverMocks.annotationsObs(["name_0"]));
 
       const df = await annoMatrix.fetch("obs", "name_0");
@@ -46,6 +49,7 @@ describe("AnnoMatrix", () => {
     });
 
     test("simple multi column fetch", async () => {
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any)
         .once(serverMocks.annotationsObs(["name_0"]))
         .once(serverMocks.annotationsObs(["n_genes"]));
@@ -56,8 +60,10 @@ describe("AnnoMatrix", () => {
     });
 
     describe("fetch from field", () => {
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       const getLastTwo = async (field: any) => {
         const columnNames = annoMatrix.getMatrixColumns(field).slice(-2);
+        // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
         (fetch as any).mockResponses(
           ...columnNames.map(() => serverMocks.responder)
         );
@@ -73,18 +79,21 @@ describe("AnnoMatrix", () => {
 
     test("fetch - test all query forms", async () => {
       // single string is a column name
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).once(serverMocks.annotationsObs(["n_genes"]));
       await expect(annoMatrix.fetch("obs", "n_genes")).resolves.toBeInstanceOf(
         Dataframe
       );
 
       // array of column names, expecting n_genes to be cached.
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).once(serverMocks.annotationsObs(["percent_mito"]));
       await expect(
         annoMatrix.fetch("obs", ["n_genes", "percent_mito"])
       ).resolves.toBeInstanceOf(Dataframe);
 
       // more complex value filter query, enumerated
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).once(serverMocks.responder);
       await expect(
         annoMatrix.fetch("X", {
@@ -98,6 +107,7 @@ describe("AnnoMatrix", () => {
 
       // more complex value filter query, range
       const varIndex = annoMatrix.schema.annotations.var.index;
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any)
         .once(
           serverMocks.withExpected("/data/var", [[`var:${varIndex}`, "SUMO3"]])
@@ -174,6 +184,7 @@ describe("AnnoMatrix", () => {
       expect(am1.nObs).toEqual(am2.nObs);
       expect(am1.nVar).toEqual(am2.nVar);
 
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any)
         .once(serverMocks.annotationsObs(["n_genes"]))
         .once(serverMocks.annotationsObs(["n_genes"]));
@@ -191,6 +202,7 @@ describe("AnnoMatrix", () => {
     // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'base' implicitly has an 'any' type.
     async function addDrop(base) {
       expect(base.getMatrixColumns("obs")).not.toContain("foo");
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).mockRejectOnce(new Error("unknown column name"));
       await expect(base.fetch("obs", "foo")).rejects.toThrow(
         "unknown column name"
@@ -216,6 +228,7 @@ describe("AnnoMatrix", () => {
       const am2 = am1.dropObsColumn("foo");
       expect(base.getMatrixColumns("obs")).not.toContain("foo");
       expect(am2.getMatrixColumns("obs")).not.toContain("foo");
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).mockRejectOnce(new Error("unknown column name"));
       await expect(am2.fetch("obs", "foo")).rejects.toThrow(
         "unknown column name"
@@ -239,6 +252,7 @@ describe("AnnoMatrix", () => {
       const am4 = clip(am3, 0, 1);
       await addDrop(am4);
 
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).mockResponse(serverMocks.responder);
 
       await am1.fetch("obs", am1.getMatrixColumns("obs"));
@@ -246,6 +260,7 @@ describe("AnnoMatrix", () => {
       await am3.fetch("obs", am3.getMatrixColumns("obs"));
       await am4.fetch("obs", am4.getMatrixColumns("obs"));
 
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).resetMocks();
 
       await addDrop(am1);
@@ -292,6 +307,7 @@ describe("AnnoMatrix", () => {
       );
 
       /* drop column */
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).mockRejectOnce(new Error("unknown column name"));
       am = am1.dropObsColumn("test");
       await expect(am.fetch("obs", "test")).rejects.toThrow(
@@ -313,6 +329,7 @@ describe("AnnoMatrix", () => {
       const am3 = isubset(annoMatrix, [10, 1, 0, 30, 2]);
       await addSetDrop(am3);
 
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).mockResponse(serverMocks.responder);
 
       await am1.fetch("obs", am1.getMatrixColumns("obs"));

client/__tests__/util/annoMatrix/crossfilter.test.ts

@@ -17,10 +17,13 @@ import { rangeFill } from "../../../src/util/range";
 enableFetchMocks();
 
 describe("AnnoMatrixCrossfilter", () => {
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   let annoMatrix: any;
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   let crossfilter: any;
 
   beforeEach(async () => {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     (fetch as any).resetMocks(); // reset all fetch mocking state
     // reset all fetch mocking state
     annoMatrix = new AnnoMatrixLoader(
@@ -68,6 +71,7 @@ describe("AnnoMatrixCrossfilter", () => {
         crossfilter.obsCrossfilter.hasDimension("obs/louvain")
       ).toBeFalsy();
 
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).once(
         serverMocks.dataframeResponse(["louvain"], [obsLouvain])
       );
@@ -79,6 +83,7 @@ describe("AnnoMatrixCrossfilter", () => {
       expect(
         newCrossfilter.obsCrossfilter.hasDimension("obs/louvain")
       ).toBeTruthy();
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       expect((fetch as any).mock.calls).toHaveLength(1);
 
       newCrossfilter = await crossfilter.select("obs", "louvain", {
@@ -90,6 +95,7 @@ describe("AnnoMatrixCrossfilter", () => {
     test("simple column select", async () => {
       let xfltr;
 
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).once(
         serverMocks.dataframeResponse(["louvain"], [obsLouvain])
       );
@@ -130,10 +136,12 @@ describe("AnnoMatrixCrossfilter", () => {
       const values = df.col("louvain").asArray();
       const selected = xfltr.allSelectedMask();
       values.every(
+        // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
         (val: any, idx: any) =>
           !["NK cells", "B cells"].includes(val) !== !selected[idx]
       );
 
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).once(
         serverMocks.dataframeResponse(["n_genes"], [new Int32Array(obsNGenes)])
       );
@@ -168,6 +176,7 @@ describe("AnnoMatrixCrossfilter", () => {
       const varIndex = annoMatrix.schema.annotations.var.index;
 
       const { nObs } = annoMatrix.schema.dataframe;
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).once(
         serverMocks.dataframeResponse(
           ["TEST"],
@@ -205,14 +214,17 @@ describe("AnnoMatrixCrossfilter", () => {
       const values = df.icol(0).asArray();
       const selected = xfltr.allSelectedMask();
       values.every(
+        // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
         (val: any, idx: any) => !(val >= 0 && val <= 50) !== !selected[idx]
       );
       expect(
+        // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
         selected.reduce((acc: any, val: any) => (val ? acc + 1 : acc), 0)
       ).toEqual(xfltr.countSelected());
     });
 
     test("spatial column select", async () => {
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).once(
         serverMocks.dataframeResponse(
           ["umap_0", "umap_1"],
@@ -241,6 +253,7 @@ describe("AnnoMatrixCrossfilter", () => {
       let xfltr = new AnnoMatrixObsCrossfilter(annoMatrixSubset);
       expect(xfltr.countSelected()).toEqual(annoMatrixSubset.nObs);
 
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).once(
         serverMocks.dataframeResponse(["louvain"], [obsLouvain])
       );
@@ -256,6 +269,7 @@ describe("AnnoMatrixCrossfilter", () => {
       const values = df.col("louvain").asArray();
       const selected = xfltr.allSelectedMask();
       values.every(
+        // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
         (val: any, idx: any) =>
           !["NK cells", "B cells"].includes(val) !== !selected[idx]
       );
@@ -270,6 +284,7 @@ describe("AnnoMatrixCrossfilter", () => {
         "unable to obsSelect upon the var dimension"
       );
 
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).mockRejectOnce(new Error("unknown column name"));
       await expect(crossfilter.select("obs", "foo")).rejects.toThrow(
         "unknown column name"
@@ -281,6 +296,7 @@ describe("AnnoMatrixCrossfilter", () => {
     /*
     test the matrix mutators via crossfilter proxy
     */
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     async function helperAddTestCol(cf: any, colName: any, colSchema = null) {
       expect(
         cf.annoMatrix.getMatrixColumns("obs").includes(colName)
@@ -301,6 +317,7 @@ describe("AnnoMatrixCrossfilter", () => {
       const xfltr = cf.addObsColumn(colSchema, Array, initValue);
       expect(
         xfltr.annoMatrix.schema.annotations.obs.columns.filter(
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           (v: any) => v.name === colName
         )
       ).toHaveLength(1);
@@ -331,6 +348,7 @@ describe("AnnoMatrixCrossfilter", () => {
       });
       expect(
         xfltr.annoMatrix.schema.annotations.obs.columns.filter(
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           (v: any) => v.name === "foo"
         )
       ).toHaveLength(1);
@@ -340,7 +358,7 @@ describe("AnnoMatrixCrossfilter", () => {
       expect(
         df
           .col("foo")
-          .asArray()
+          .asArray() // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           .every((v: any) => v === "A")
       ).toBeTruthy();
 
@@ -378,10 +396,12 @@ describe("AnnoMatrixCrossfilter", () => {
       xfltr = xfltr.dropObsColumn("foo");
       expect(
         xfltr.annoMatrix.schema.annotations.obs.columns.filter(
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           (v: any) => v.name === "foo"
         )
       ).toHaveLength(0);
       expect(xfltr.annoMatrix.schema.annotations.obsByName.foo).toBeUndefined();
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).mockRejectOnce(new Error("unknown column name"));
       await expect(xfltr.annoMatrix.fetch("obs", "foo")).rejects.toThrow(
         "unknown column name"
@@ -395,6 +415,7 @@ describe("AnnoMatrixCrossfilter", () => {
       });
       xfltr = xfltr.dropObsColumn("bar");
 
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).mockRejectOnce(new Error("unknown column name"));
       await expect(xfltr.select("obs", "bar", { mode: "all" })).rejects.toThrow(
         "unknown column name"
@@ -421,6 +442,7 @@ describe("AnnoMatrixCrossfilter", () => {
         type: "categorical",
       });
 
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).mockRejectOnce(new Error("unknown column name"));
       await expect(xfltr.annoMatrix.fetch("obs", "foo")).rejects.toThrow(
         "unknown column name"
@@ -436,6 +458,7 @@ describe("AnnoMatrixCrossfilter", () => {
       });
       xfltr = xfltr.renameObsColumn("bar", "xyz");
 
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).mockRejectOnce(new Error("unknown column name"));
       await expect(xfltr.select("obs", "bar", { mode: "all" })).rejects.toThrow(
         "unknown column name"
@@ -446,6 +469,7 @@ describe("AnnoMatrixCrossfilter", () => {
     });
 
     test("addObsAnnoCategory", async () => {
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       let xfltr: any;
 
       // catch unknown or readonly columns
@@ -515,7 +539,7 @@ describe("AnnoMatrixCrossfilter", () => {
       expect(
         (await xfltr.annoMatrix.fetch("obs", "foo"))
           .col("foo")
-          .asArray()
+          .asArray() // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           .every((v: any) => v === "unassigned")
       ).toBeTruthy();
       expect(xfltr.annoMatrix.getColumnSchema("obs", "foo")).toMatchObject({
@@ -534,7 +558,7 @@ describe("AnnoMatrixCrossfilter", () => {
       expect(
         (await xfltr1.annoMatrix.fetch("obs", "foo"))
           .col("foo")
-          .asArray()
+          .asArray() // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           .every((v: any) => v === "unassigned")
       ).toBeTruthy();
       expect(xfltr1.annoMatrix.getColumnSchema("obs", "foo")).toMatchObject({
@@ -557,7 +581,7 @@ describe("AnnoMatrixCrossfilter", () => {
       expect(
         (await xfltr2.annoMatrix.fetch("obs", "foo"))
           .col("foo")
-          .asArray()
+          .asArray() // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           .every((v: any) => v === "red")
       ).toBeTruthy();
       expect(xfltr2.annoMatrix.getColumnSchema("obs", "foo")).toMatchObject({
@@ -593,7 +617,7 @@ describe("AnnoMatrixCrossfilter", () => {
       expect(
         (await xfltr.annoMatrix.fetch("obs", "foo"))
           .col("foo")
-          .asArray()
+          .asArray() // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           .every((v: any) => v === "unassigned")
       ).toBeTruthy();
       const xfltr1 = await xfltr.setObsColumnValues("foo", [0, 10], "purple");
@@ -602,6 +626,7 @@ describe("AnnoMatrixCrossfilter", () => {
           .col("foo")
           .asArray()
           .every(
+            // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
             (v: any, i: any) =>
               v === "unassigned" || (v === "purple" && (i === 0 || i === 10))
           )
@@ -660,7 +685,7 @@ describe("AnnoMatrixCrossfilter", () => {
       expect(
         (await xfltr1.annoMatrix.fetch("obs", "foo"))
           .col("foo")
-          .asArray()
+          .asArray() // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           .filter((v: any) => v === "purple")
       ).toHaveLength(2);
 
@@ -668,13 +693,13 @@ describe("AnnoMatrixCrossfilter", () => {
       expect(
         (await xfltr1.annoMatrix.fetch("obs", "foo"))
           .col("foo")
-          .asArray()
+          .asArray() // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           .filter((v: any) => v === "magenta")
       ).toHaveLength(2);
       expect(
         (await xfltr1.annoMatrix.fetch("obs", "foo"))
           .col("foo")
-          .asArray()
+          .asArray() // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           .filter((v: any) => v === "purple")
       ).toHaveLength(0);
       expect(xfltr1.annoMatrix.getColumnSchema("obs", "foo")).toMatchObject({
@@ -695,6 +720,7 @@ describe("AnnoMatrixCrossfilter", () => {
   describe("edge cases", () => {
     test("transition from empty annoMatrix", async () => {
       // select before fetch needs to work
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).once(
         serverMocks.dataframeResponse(["louvain"], [obsLouvain])
       );
@@ -702,6 +728,7 @@ describe("AnnoMatrixCrossfilter", () => {
         mode: "exact",
         values: "B cells",
       });
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       expect((fetch as any).mock.calls).toHaveLength(1);
       expect(xfltr.obsCrossfilter.hasDimension("obs/louvain")).toBeTruthy();
       expect(xfltr.obsCrossfilter.all()).toBe(xfltr.annoMatrix._cache.obs);

client/__tests__/util/annoMatrix/serverMocks/index.ts

@@ -1,5 +1,6 @@
 export const baseDataURL = "https://a.fake.url/api/v0.2";
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 (window as any).CELLXGENE = {
   API: {
     prefix: baseDataURL,

client/__tests__/util/annoMatrix/serverMocks/routes.ts

@@ -14,6 +14,7 @@ const indexedSchema = {
   ),
 };
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function makeMockColumn(s: any, length: any) {
   const { type } = s;
   switch (type) {
@@ -37,8 +38,10 @@ function makeMockColumn(s: any, length: any) {
   }
 }
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function getEncodedDataframe(colNames: any, length: any, colSchemas: any) {
   const colIndex = new KeyIndex(colNames);
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   const columns = colSchemas.map((s: any) => makeMockColumn(s, length));
   // @ts-expect-error ts-migrate(2345) FIXME: Argument of type 'KeyIndex' is not assignable to p... Remove this comment to see the full error message
   const df = new Dataframe([length, colNames.length], columns, null, colIndex);
@@ -46,6 +49,7 @@ function getEncodedDataframe(colNames: any, length: any, colSchemas: any) {
   return body;
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export function dataframeResponse(colNames: any, columns: any) {
   const colIndex = new KeyIndex(colNames);
   const df = new Dataframe(
@@ -62,8 +66,10 @@ export function dataframeResponse(colNames: any, columns: any) {
   return () => Promise.resolve({ body, init: { status: 200, headers } });
 }
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function annotationObsResponse(request: any) {
   const url = new URL(request.url);
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   const params = Array.from((url.searchParams as any).entries());
   const names = params
     // @ts-expect-error ts-migrate(2769) FIXME: No overload matches this call.
@@ -91,8 +97,10 @@ function annotationObsResponse(request: any) {
   });
 }
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function annotationVarResponse(request: any) {
   const url = new URL(request.url);
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   const params = Array.from((url.searchParams as any).entries());
   const names = params
     // @ts-expect-error ts-migrate(2769) FIXME: No overload matches this call.
@@ -120,8 +128,10 @@ function annotationVarResponse(request: any) {
   });
 }
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function layoutObsResponse(request: any) {
   const url = new URL(request.url);
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   const params = Array.from((url.searchParams as any).entries());
   // @ts-expect-error ts-migrate(2769) FIXME: No overload matches this call.
   const names = params.filter(([k]) => k === "layout-name").map(([, v]) => v);
@@ -150,10 +160,13 @@ function layoutObsResponse(request: any) {
   });
 }
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function dataVarResponse(request: any) {
   const url = new URL(request.url);
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   const params = Array.from((url.searchParams as any).entries());
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   const colNames = params.map((v) => `${(v as any)[0]}/${(v as any)[1]}`);
   const colSchemas = colNames.map(() => schema.schema.dataframe);
   const body = getEncodedDataframe(
@@ -171,6 +184,7 @@ function dataVarResponse(request: any) {
   });
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export function responder(request: any) {
   const url = new URL(request.url);
   const { pathname } = url;
@@ -189,29 +203,34 @@ export function responder(request: any) {
   return Promise.reject(new Error("bad URL"));
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export function withExpected(expectedURL: any, expectedParams: any) {
   /*
   Do some additional error checking
   */
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   return (request: any) => {
     // if URL is bogus, reject the promise
     const url = new URL(request.url);
     if (!url.pathname.endsWith(expectedURL)) {
       return Promise.reject(new Error("Unexpected URL!"));
     }
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     const params = Array.from((url.searchParams as any).entries()).sort(
       // @ts-expect-error ts-migrate(2345) FIXME: Argument of type '(a: unknown, b: unknown) => bool... Remove this comment to see the full error message
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (a, b) => (a as any)[0] < (b as any)[0]
     );
     expectedParams = expectedParams
-      .slice()
+      .slice() // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       .sort((a: any, b: any) => a[0] < b[0]);
 
     if (
       params.length !== expectedParams.length ||
       !params.every(
         (p, i) =>
-          (p as any)[0] === expectedParams[i][0] &&
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
+          (p as any)[0] === expectedParams[i][0] && // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           (p as any)[1] === expectedParams[i][1]
       )
     ) {
@@ -222,9 +241,11 @@ export function withExpected(expectedURL: any, expectedParams: any) {
   };
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export function annotationsObs(names: any) {
   return withExpected(
     "/annotations/obs",
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     names.map((name: any) => ["annotation-name", name])
   );
 }

client/__tests__/util/annoMatrix/whereCache.test.ts

@@ -219,13 +219,16 @@ describe("whereCache", () => {
       })
     );
     // @ts-expect-error ts-migrate(2531) FIXME: Object is possibly 'null'.
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     expect((wc.where as any).field.queryField.has("queryColumn")).toEqual(true);
     expect(
       // @ts-expect-error ts-migrate(2531) FIXME: Object is possibly 'null'.
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (wc.where as any).field.queryField.get("queryColumn")
     ).toBeInstanceOf(Map);
     expect(
       // @ts-expect-error ts-migrate(2531) FIXME: Object is possibly 'null'.
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (wc.where as any).field.queryField.get("queryColumn").has("queryValue")
     ).toEqual(true);
     expect(_whereCacheGet(wc, schema, "field", query)).toEqual([0, 1, 2]);

client/__tests__/util/centroid.test.ts

@@ -8,8 +8,11 @@ import { indexEntireSchema } from "../../src/util/stateManager/schemaHelpers";
 import { _normalizeCategoricalSchema } from "../../src/annoMatrix/schema";
 
 describe("centroid", () => {
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   let schema: any;
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   let obsAnnotations: any;
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   let obsLayout: any;
 
   beforeAll(() => {
@@ -44,6 +47,7 @@ describe("centroid", () => {
       quantile([0.5], obsLayout.col("umap_1").asArray())[0],
     ];
 
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     centroidResult.forEach((coordinate: any) => {
       expect(coordinate).toEqual(expectedResult);
     });
@@ -68,6 +72,7 @@ describe("centroid", () => {
       quantile([0.5], obsLayout.col("umap_1").asArray())[0],
     ];
 
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     centroidResult.forEach((coordinate: any) => {
       expect(coordinate).toEqual(expectedResult);
     });

client/__tests__/util/dataframe/dataframe.test.ts

@@ -811,6 +811,7 @@ describe("dataframe factories", () => {
           new Float64Array(3).fill(1.1),
         ]
       );
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       const dfB = dfA.mapColumns((col: any, idx: any) => {
         expect(dfA.icol(idx).asArray()).toBe(col);
         return col;
@@ -869,6 +870,7 @@ describe("dataframe factories", () => {
 });
 
 describe("dataframe col", () => {
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   let df: any = null;
   beforeEach(() => {
     df = new Dataframe.Dataframe(

client/__tests__/util/dataframe/summarize.test.ts

@@ -1,5 +1,6 @@
 import * as Dataframe from "../../../src/util/dataframe";
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function float32Conversion(f: any) {
   return new Float32Array([f])[0];
 }

client/__tests__/util/promiseLimit.test.ts

@@ -1,6 +1,7 @@
 import PromiseLimit from "../../src/util/promiseLimit";
 import { range } from "../../src/util/range";
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 const delay = (t: any) => new Promise((resolve) => setTimeout(resolve, t));
 
 describe("PromiseLimit", () => {
@@ -52,6 +53,7 @@ describe("PromiseLimit", () => {
     };
 
     // @ts-expect-error ts-migrate(2554) FIXME: Expected 3 arguments, but got 1.
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     await Promise.all(range(10).map((i: any) => plimit.add(() => callback(i))));
 
     expect(maxRunning).toEqual(2);

client/__tests__/util/stateManager/colorHelpers.test.ts

@@ -125,6 +125,7 @@ describe("categorical color helpers", () => {
       Array.from(schema.annotations.obsByName.categoricalColumn.categories)
     );
     const userDefinedColorTable = {
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       categoricalColumn: shuffleCats.reduce((acc: any, label: any) => {
         acc[label] = randRGBColor();
         return acc;
@@ -159,23 +160,29 @@ TODO:
 2. user defined colors
 */
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function indexSchema(schema: any) {
   schema.annotations.obsByName = Object.fromEntries(
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     schema.annotations?.obs?.columns?.map((v: any) => [v.name, v]) ?? []
   );
   schema.annotations.varByName = Object.fromEntries(
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     schema.annotations?.var?.columns?.map((v: any) => [v.name, v]) ?? []
   );
   schema.layout.obsByName = Object.fromEntries(
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     schema.layout?.obs?.map((v: any) => [v.name, v]) ?? []
   );
   schema.layout.varByName = Object.fromEntries(
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     schema.layout?.var?.map((v: any) => [v.name, v]) ?? []
   );
 
   return schema;
 }
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function makeScale(rgb: any) {
   // make a scale string from a rgb float triple
   return `rgb(${(rgb[0] * 255) >>> 0}, ${(rgb[1] * 255) >>> 0}, ${
@@ -183,6 +190,7 @@ function makeScale(rgb: any) {
   })`;
 }
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function shuffle(array: any) {
   for (let i = array.length - 1; i > 0; i -= 1) {
     const j = (Math.random() * (i + 1)) >>> 0;

client/__tests__/util/stateManager/sampleResponses.ts

@@ -107,8 +107,11 @@ const anAnnotationsVarJSONResponse = {
     .value(),
 };
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function encodeTypedArray(builder: any, uType: any, uData: any) {
+  // @ts-expect-error --- FIXME: Element implicitly has an 'any' type.
   const uTypeName = NetEncoding.TypedArray[uType];
+  // @ts-expect-error --- FIXME: Element implicitly has an 'any' type.
   const ArrayType = NetEncoding[uTypeName];
   const dv = ArrayType.createDataVector(builder, uData);
   builder.startObject(1);
@@ -116,6 +119,7 @@ function encodeTypedArray(builder: any, uType: any, uData: any) {
   return builder.endObject();
 }
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function encodeMatrix(columns: any, colIndex = undefined) {
   /*
   IMPORTANT: this is not a general purpose encoder.  in particular,

client/__tests__/util/typedCrossfilter/crossfilter.test.ts

@@ -126,6 +126,7 @@ const someData = [
   },
 ];
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 let payments: any = null;
 beforeEach(() => {
   payments = new Crossfilter(someData);
@@ -141,6 +142,7 @@ describe("ImmutableTypedCrossfilter", () => {
       .addDimension(
         "quantity",
         "scalar",
+        // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
         (i: any, d: any) => d[i].quantity,
         Int32Array
       )
@@ -163,6 +165,7 @@ describe("ImmutableTypedCrossfilter", () => {
     const p2 = payments.addDimension(
       "quantity",
       "scalar",
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (i: any, data: any) => data[i].quantity,
       Int32Array
     );
@@ -183,16 +186,18 @@ describe("ImmutableTypedCrossfilter", () => {
       .addDimension(
         "quantity",
         "scalar",
+        // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
         (i: any, d: any) => d[i].quantity,
         Int32Array
-      )
+      ) // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       .addDimension("tip", "scalar", (i: any, d: any) => d[i].tip, Float32Array)
       .addDimension(
         "total",
         "scalar",
+        // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
         (i: any, d: any) => d[i].total,
         Float32Array
-      )
+      ) // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       .addDimension("type", "enum", (i: any, d: any) => d[i].type);
     expect(p).toBeDefined();
 
@@ -245,18 +250,21 @@ describe("ImmutableTypedCrossfilter", () => {
   });
 
   describe("scalar dimension", () => {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     let p: any;
     beforeEach(() => {
       p = payments
         .addDimension(
           "quantity",
           "scalar",
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           (i: any, d: any) => d[i].quantity,
           Int32Array
         )
         .addDimension(
           "tip",
           "scalar",
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           (i: any, d: any) => d[i].tip,
           Float32Array
         )
@@ -302,8 +310,10 @@ describe("ImmutableTypedCrossfilter", () => {
   });
 
   describe("enum dimension", () => {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     let p: any;
     beforeEach(() => {
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       p = payments.addDimension("type", "enum", (i: any, d: any) => d[i].type);
     });
 
@@ -342,6 +352,7 @@ describe("ImmutableTypedCrossfilter", () => {
   });
 
   describe("spatial dimension", () => {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     let p: any;
     beforeEach(() => {
       const X = someData.map((r) => r.coords[0]);
@@ -431,18 +442,21 @@ describe("ImmutableTypedCrossfilter", () => {
   });
 
   describe("non-finite scalars", () => {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     let p: any;
     beforeEach(() => {
       p = payments
         .addDimension(
           "quantity",
           "scalar",
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           (i: any, d: any) => d[i].quantity,
           Int32Array
         )
         .addDimension(
           "nonFinite",
           "scalar",
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           (i: any, d: any) => d[i].nonFinite,
           Float32Array
         )

client/__tests__/util/typedCrossfilter/sort.test.ts

@@ -15,6 +15,7 @@ paths for:
 const pInf = Number.POSITIVE_INFINITY;
 const nInf = Number.NEGATIVE_INFINITY;
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function fillRange(arr: any, start = 0) {
   const larr = arr;
   for (let i = 0, len = larr.length; i < len; i += 1) {
@@ -23,6 +24,7 @@ function fillRange(arr: any, start = 0) {
   return larr;
 }
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function fillRand(arr: any) {
   for (let i = 0, len = arr.length; i < len; i += 1) {
     arr[i] = Math.random();
@@ -140,6 +142,7 @@ describe("sortIndex", () => {
         const source1 = Type.from([6, 5, 4, 3, 2, 1, 0]);
         const index1 = fillRange(new Uint32Array(source1.length));
         expect(sortIndex(index1, source1)).toMatchObject(
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           index1.sort((a: any, b: any) => source1[a] - source1[b])
         );
 
@@ -147,12 +150,14 @@ describe("sortIndex", () => {
         const source2 = Type.from([6, 5, 4, 3, 2, 1]);
         const index2 = fillRange(new Uint32Array(source2.length));
         expect(sortIndex(index2, source2)).toMatchObject(
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           index2.sort((a: any, b: any) => source1[a] - source1[b])
         );
 
         const source3 = fillRand(new Type(1000));
         const index3 = fillRange(new Uint32Array(source3.length));
         expect(sortIndex(index3, source3)).toMatchObject(
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           index3.sort((a: any, b: any) => source1[a] - source1[b])
         );
       })