Added @typescript-eslint/recommended config with suppressions (#2345)

* Disabled @blueprintjs/classes-constants. #2288.

* thuang-eslint-bp-off (#2344)

* Disabled @blueprintjs/classes-constants on webpack dev and shared. #2288.

* Added TS recommended, suppress lint errors codemod.

* Added per-error/warning ignore for tests.

* Added per-error/warning ignore for configuration.

* Added per-error/warning ignore for src. Removed suppress package.

* Minor linting.

Co-authored-by: Timmy Huang <tihuan@users.noreply.github.com>

client/__tests__/e2e/cellxgeneActions.ts

@@ -18,6 +18,7 @@ import {
 
 import { appUrlBase, TEST_EMAIL, TEST_PASSWORD } from "./config";
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function drag(testId: any, start: any, end: any, lasso = false) {
   const layout = await waitByID(testId);
   // @ts-expect-error ts-migrate(2531) FIXME: Object is possibly 'null'.
@@ -43,6 +44,7 @@ export async function drag(testId: any, start: any, end: any, lasso = false) {
   await page.mouse.up();
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function clickOnCoordinate(testId: any, coord: any) {
   const layout = await expect(page).toMatchElement(getTestId(testId));
   const elBox = await layout.boxModel();
@@ -56,7 +58,9 @@ export async function clickOnCoordinate(testId: any, coord: any) {
   await page.mouse.click(x, y);
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function getAllHistograms(testclass: any, testIds: any) {
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   const histTestIds = testIds.map((tid: any) => `histogram-${tid}`);
 
   // these load asynchronously, so we need to wait for each histogram individually,
@@ -77,6 +81,7 @@ export async function getAllHistograms(testclass: any, testIds: any) {
   return testIDs.map((id) => id.replace(/^histogram-/, ""));
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function getAllCategoriesAndCounts(category: any) {
   // these load asynchronously, so we have to wait for the specific category.
   await waitByID(`category-${category}`);
@@ -93,6 +98,7 @@ export async function getAllCategoriesAndCounts(category: any) {
 
           const count = (row.querySelector(
             "[data-testclass='categorical-value-count']"
+            // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           ) as any).innerText;
 
           return [cat, count];
@@ -101,11 +107,13 @@ export async function getAllCategoriesAndCounts(category: any) {
   );
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function getCellSetCount(num: any) {
   await clickOn(`cellset-button-${num}`);
   return getOneElementInnerText(`[data-testid='cellset-count-${num}']`);
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function resetCategory(category: any) {
   const checkboxId = `${category}:category-select`;
   await waitByID(checkboxId);
@@ -125,9 +133,13 @@ export async function resetCategory(category: any) {
   if (isExpanded) await clickOn(`${category}:category-expand`);
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
 export async function calcCoordinate(
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   testId: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   xAsPercent: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   yAsPercent: any
 ) {
   const el = await waitByID(testId);
@@ -141,8 +153,11 @@ export async function calcCoordinate(
   };
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
 export async function calcDragCoordinates(
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   testId: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   coordinateAsPercent: any
 ) {
   return {
@@ -159,6 +174,7 @@ export async function calcDragCoordinates(
   };
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function selectCategory(category: any, values: any, reset = true) {
   if (reset) await resetCategory(category);
 
@@ -170,6 +186,7 @@ export async function selectCategory(category: any, values: any, reset = true) {
   }
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function expandCategory(category: any) {
   const expand = await waitByID(`${category}:category-expand`);
   // @ts-expect-error ts-migrate(2531) FIXME: Object is possibly 'null'.
@@ -179,6 +196,7 @@ export async function expandCategory(category: any) {
   if (notExpanded) await clickOn(`${category}:category-expand`);
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
 export async function clip(min = 0, max = 100) {
   await clickOn("visualization-settings");
   await clearInputAndTypeInto("clip-min-input", min);
@@ -186,6 +204,7 @@ export async function clip(min = 0, max = 100) {
   await clickOn("clip-commit");
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function createCategory(categoryName: any) {
   await clickOnUntil("open-annotation-dialog", async () => {
     await expect(page).toMatchElement(getTestId("new-category-name"));
@@ -201,14 +220,17 @@ export async function createCategory(categoryName: any) {
 
 */
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function colorByGeneset(genesetName: any) {
   await clickOn(`${genesetName}:colorby-entire-geneset`);
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function colorByGene(gene: any) {
   await clickOn(`colorby-${gene}`);
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function assertColorLegendLabel(label: any) {
   const handle = await waitByID("continuous_legend_color_by_label");
 
@@ -220,6 +242,7 @@ export async function assertColorLegendLabel(label: any) {
   return expect(result).toBe(label);
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function expandGeneset(genesetName: any) {
   const expand = await waitByID(`${genesetName}:geneset-expand`);
   // @ts-expect-error ts-migrate(2531) FIXME: Object is possibly 'null'.
@@ -229,6 +252,7 @@ export async function expandGeneset(genesetName: any) {
   if (notExpanded) await clickOn(`${genesetName}:geneset-expand`);
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function createGeneset(genesetName: any) {
   await clickOnUntil("open-create-geneset-dialog", async () => {
     await expect(page).toMatchElement(getTestId("create-geneset-input"));
@@ -239,6 +263,7 @@ export async function createGeneset(genesetName: any) {
   await waitByClass("autosave-complete");
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function editGenesetName(genesetName: any, editText: any) {
   const editButton = `${genesetName}:edit-genesetName-mode`;
   const submitButton = `${genesetName}:submit-geneset`;
@@ -250,6 +275,7 @@ export async function editGenesetName(genesetName: any, editText: any) {
   await clickOn(submitButton);
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function deleteGeneset(genesetName: any) {
   const targetId = `${genesetName}:delete-geneset`;
 
@@ -263,6 +289,7 @@ export async function deleteGeneset(genesetName: any) {
   await waitByClass("autosave-complete");
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function assertGenesetDoesNotExist(genesetName: any) {
   // @ts-expect-error ts-migrate(2554) FIXME: Expected 2 arguments, but got 1.
   const result = await isElementPresent(
@@ -271,6 +298,7 @@ export async function assertGenesetDoesNotExist(genesetName: any) {
   await expect(result).toBe(false);
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function assertGenesetExists(genesetName: any) {
   const handle = await waitByID(`${genesetName}:geneset-name`);
 
@@ -288,6 +316,7 @@ export async function assertGenesetExists(genesetName: any) {
 
 */
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function addGeneToSet(genesetName: any, geneToAddToSet: any) {
   const submitButton = `${genesetName}:submit-gene`;
 
@@ -296,6 +325,7 @@ export async function addGeneToSet(genesetName: any, geneToAddToSet: any) {
   await clickOn(submitButton);
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function removeGene(geneSymbol: any) {
   const targetId = `delete-from-geneset:${geneSymbol}`;
 
@@ -304,6 +334,7 @@ export async function removeGene(geneSymbol: any) {
   await waitByClass("autosave-complete");
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function assertGeneExistsInGeneset(geneSymbol: any) {
   const handle = await waitByID(`${geneSymbol}:gene-label`);
 
@@ -315,6 +346,7 @@ export async function assertGeneExistsInGeneset(geneSymbol: any) {
   return expect(result).toBe(geneSymbol);
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function assertGeneDoesNotExist(geneSymbol: any) {
   // @ts-expect-error ts-migrate(2554) FIXME: Expected 2 arguments, but got 1.
   const result = await isElementPresent(getTestId(`${geneSymbol}:gene-label`));
@@ -322,6 +354,7 @@ export async function assertGeneDoesNotExist(geneSymbol: any) {
   await expect(result).toBe(false);
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function expandGene(geneSymbol: any) {
   await clickOn(`maximize-${geneSymbol}`);
 }
@@ -332,6 +365,7 @@ export async function expandGene(geneSymbol: any) {
 
 */
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function duplicateCategory(categoryName: any) {
   await clickOn("open-annotation-dialog");
 
@@ -358,8 +392,11 @@ export async function duplicateCategory(categoryName: any) {
   await waitByClass("autosave-complete");
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
 export async function renameCategory(
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   oldCategoryName: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   newCategoryName: any
 ) {
   await clickOn(`${oldCategoryName}:see-actions`);
@@ -371,6 +408,7 @@ export async function renameCategory(
   await clickOn(`${oldCategoryName}:submit-category-edit`);
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function deleteCategory(categoryName: any) {
   const targetId = `${categoryName}:delete-category`;
 
@@ -384,6 +422,7 @@ export async function deleteCategory(categoryName: any) {
   await assertCategoryDoesNotExist();
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function createLabel(categoryName: any, labelName: any) {
   /**
    * (thuang): This explicit wait is needed, since currently showing
@@ -409,15 +448,20 @@ export async function createLabel(categoryName: any, labelName: any) {
   await clickOn(`${categoryName}:submit-label`);
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function deleteLabel(categoryName: any, labelName: any) {
   await expandCategory(categoryName);
   await clickOn(`${categoryName}:${labelName}:see-actions`);
   await clickOn(`${categoryName}:${labelName}:delete-label`);
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
 export async function renameLabel(
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   categoryName: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   oldLabelName: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   newLabelName: any
 ) {
   await expandCategory(categoryName);
@@ -430,12 +474,14 @@ export async function renameLabel(
   await clickOn(`${categoryName}:${oldLabelName}:submit-label-edit`);
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function addGeneToSearch(geneName: any) {
   await typeInto("gene-search", geneName);
   await page.keyboard.press("Enter");
   await page.waitForSelector(`[data-testid='histogram-${geneName}']`);
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function subset(coordinatesAsPercent: any) {
   // In order to deselect the selection after the subset, make sure we have some clear part
   // of the scatterplot we can click on
@@ -450,7 +496,9 @@ export async function subset(coordinatesAsPercent: any) {
   await clickOnCoordinate("layout-graph", clearCoordinate);
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function setSellSet(cellSet: any, cellSetNum: any) {
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   const selections = cellSet.filter((sel: any) => sel.kind === "categorical");
 
   for (const selection of selections) {
@@ -460,18 +508,21 @@ export async function setSellSet(cellSet: any, cellSetNum: any) {
   await getCellSetCount(cellSetNum);
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function runDiffExp(cellSet1: any, cellSet2: any) {
   await setSellSet(cellSet1, 1);
   await setSellSet(cellSet2, 2);
   await clickOn("diffexp-button");
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function bulkAddGenes(geneNames: any) {
   await clickOn("section-bulk-add");
   await typeInto("input-bulk-add", geneNames.join(","));
   await page.keyboard.press("Enter");
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function assertCategoryDoesNotExist(categoryName: any) {
   // @ts-expect-error ts-migrate(2554) FIXME: Expected 2 arguments, but got 1.
   const result = await isElementPresent(
@@ -481,6 +532,7 @@ export async function assertCategoryDoesNotExist(categoryName: any) {
   await expect(result).toBe(false);
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
 export async function login() {
   await goToPage(appUrlBase);
 
@@ -502,6 +554,7 @@ export async function login() {
   expect(page.url()).toContain(appUrlBase);
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
 export async function logout() {
   await clickOnUntil("user-info", async () => {
     await waitByID("log-out");
@@ -514,6 +567,7 @@ export async function logout() {
   await waitByID("log-in");
 }
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 async function waitUntilFormFieldStable(selector: any) {
   const MAX_RETRY = 10;
   const WAIT_FOR_MS = 200;

client/__tests__/e2e/e2eAnnotations.test.ts

@@ -76,6 +76,7 @@ const brushThisGeneGeneset = "brush_this_gene";
 const geneBrushedCellCount = "109";
 const subsetGeneBrushedCellCount = "96";
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 async function setup(config: any) {
   await goToPage(appUrlBase);
 
@@ -150,6 +151,7 @@ describe.each([
     await expect(page).toClick(getTestClass("pop-1-geneset-expand"));
 
     await page.waitForFunction(
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (selector: any) => !document.querySelector(selector),
       {},
       getTestClass("gene-loading-spinner")
@@ -165,6 +167,7 @@ describe.each([
     await expect(page).toClick(getTestClass("pop-2-geneset-expand"));
 
     await page.waitForFunction(
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (selector: any) => !document.querySelector(selector),
       {},
       getTestClass("gene-loading-spinner")
@@ -362,9 +365,11 @@ describe.each([
     expect(actualLabelName).toBe(expectedLabelName);
     expect(actualLabelCount).toBe(expectedLabelCount);
 
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     async function getInnerText(element: any, className: any) {
       return element.$eval(
         getTestClass(className),
+        // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
         (node: any) => node?.innerText
       );
     }
@@ -531,6 +536,7 @@ describe.each([
     expect(result).toMatchSnapshot();
   });
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   async function assertCategoryExists(categoryName: any) {
     const handle = await waitByID(`${categoryName}:category-label`);
 
@@ -542,6 +548,7 @@ describe.each([
     return expect(result).toBe(categoryName);
   }
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   async function assertLabelExists(categoryName: any, labelName: any) {
     await expect(page).toMatchElement(
       getTestId(`${categoryName}:category-expand`)
@@ -559,6 +566,7 @@ describe.each([
     ).toBe(labelName);
   }
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   async function assertLabelDoesNotExist(categoryName: any, labelName: any) {
     await expandCategory(categoryName);
     const result = await page.$(

client/__tests__/e2e/puppeteer.setup.ts

@@ -50,6 +50,7 @@ beforeEach(async () => {
         }
         const errorMsgText = await Promise.all(
           // TODO can we do this without internal properties?
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           msg.args().map((arg: any) => arg._remoteObject.description)
         );
         throw new Error(`Console error: ${errorMsgText}`);

client/__tests__/e2e/puppeteerUtils.ts

@@ -1,30 +1,38 @@
 /* eslint-disable no-await-in-loop -- await in loop is needed to emulate sequential user actions */
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export function getTestId(id: any) {
   return `[data-testid='${id}']`;
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export function getTestClass(className: any) {
   return `[data-testclass='${className}']`;
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function waitByID(testId: any, props = {}) {
   return page.waitForSelector(getTestId(testId), props);
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function waitByClass(testClass: any, props = {}) {
   return page.waitForSelector(`[data-testclass='${testClass}']`, props);
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function waitForAllByIds(testIds: any) {
   await Promise.all(
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     testIds.map((testId: any) => page.waitForSelector(getTestId(testId)))
   );
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function getAllByClass(testClass: any) {
   return page.$$(`[data-testclass=${testClass}]`);
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function typeInto(testId: any, text: any) {
   // blueprint's  typeahead is treating typing weird, clicking & waiting first solves this
   // only works for text without special characters
@@ -36,6 +44,7 @@ export async function typeInto(testId: any, text: any) {
   await page.type(selector, text);
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function clearInputAndTypeInto(testId: any, text: any) {
   await waitByID(testId);
   const selector = getTestId(testId);
@@ -49,6 +58,7 @@ export async function clearInputAndTypeInto(testId: any, text: any) {
   await page.type(selector, text);
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function clickOn(testId: any, options = {}) {
   await expect(page).toClick(getTestId(testId), options);
 }
@@ -57,6 +67,7 @@ export async function clickOn(testId: any, options = {}) {
  * (thuang): There are times when Puppeteer clicks on a button and the page doesn't respond.
  * So I added clickOnUntil() to retry clicking until a given condition is met.
  */
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function clickOnUntil(testId: any, assert: any) {
   const MAX_RETRY = 10;
   const WAIT_FOR_MS = 200;
@@ -81,18 +92,22 @@ export async function clickOnUntil(testId: any, assert: any) {
   }
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function getOneElementInnerHTML(selector: any, options = {}) {
   await page.waitForSelector(selector, options);
 
   return page.$eval(selector, (el) => el.innerHTML);
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function getOneElementInnerText(selector: any) {
   expect(page).toMatchElement(selector);
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   return page.$eval(selector, (el) => (el as any).innerText);
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function getElementCoordinates(testId: any) {
   return page.$eval(getTestId(testId), (elem) => {
     const { left, top } = elem.getBoundingClientRect();
@@ -118,6 +133,7 @@ async function nameNewAnnotation() {
   }
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function goToPage(url: any) {
   await page.goto(url, {
     waitUntil: "networkidle0",
@@ -127,6 +143,7 @@ export async function goToPage(url: any) {
   await clickTermsOfService();
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 export async function isElementPresent(selector: any, options: any) {
   // @ts-expect-error ts-migrate(2554) FIXME: Expected 1 arguments, but got 2.
   return Boolean(await page.$(selector, options));

client/__tests__/e2e/screenshot_env.js

@@ -1,8 +1,11 @@
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const PuppeteerEnvironment = require("jest-environment-puppeteer");
 require("jest-circus");
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const ENV_DEFAULT = require("../../../environment.default.json");
 
 // @ts-expect-error ts-migrate(2451) FIXME: Cannot redeclare block-scoped variable 'takeScreen... Remove this comment to see the full error message
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const takeScreenshot = require("./takeScreenshot");
 
 class ScreenshotEnvironment extends PuppeteerEnvironment {

client/__tests__/globalSetup.ts

@@ -1,9 +1,12 @@
-// @ts-ignore FIXME revisit from ts-migrate
+// eslint-disable-next-line @typescript-eslint/ban-ts-comment --- FIXME: disabled temporarily on migrate to TS.
+// @ts-ignore FIXME: 'globalSetup.ts' cannot be compiled under '--isola... Remove this comment to see the full error message
 const {
   SecretsManagerClient,
   GetSecretValueCommand,
+  // eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 } = require("@aws-sdk/client-secrets-manager");
 
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const { setup } = require("jest-environment-puppeteer");
 
 const client = new SecretsManagerClient({ region: "us-west-2" });

client/__tests__/reducers/cascade.test.ts

@@ -21,9 +21,13 @@ describe("cascade", () => {
       [
         "foo",
         (
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           currentState: any,
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           action: any,
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           nextSharedState: any,
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           prevSharedState: any
         ) => {
           expect(currentState).toBeUndefined();
@@ -36,9 +40,13 @@ describe("cascade", () => {
       [
         "bar",
         (
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           currentState: any,
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           action: any,
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           nextSharedState: any,
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           prevSharedState: any
         ) => {
           expect(currentState).toBeUndefined();

client/__tests__/reducers/undoable.test.ts

@@ -24,6 +24,7 @@ describe("create", () => {
 describe("undo", () => {
   test("expected state modifications", () => {
     const initialState = { a: 0, b: 1000 };
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     const reducer = (state: any) => {
       return { a: state.a + 1, b: state.b + 1 };
     };
@@ -44,9 +45,11 @@ describe("undo", () => {
 
 describe("redo", () => {
   const initialState = { a: 0, b: 1000 };
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   const reducer = (state: any) => {
     return { a: state.a + 1, b: state.b + 1 };
   };
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   let UR: any;
 
   beforeEach(() => {

client/__tests__/util/annoMatrix/annoMatrix.test.ts

@@ -14,9 +14,11 @@ import { Dataframe } from "../../../src/util/dataframe";
 enableFetchMocks();
 
 describe("AnnoMatrix", () => {
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   let annoMatrix: any;
 
   beforeEach(async () => {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     (fetch as any).resetMocks(); // reset all fetch mocking state
     // reset all fetch mocking state
     annoMatrix = new AnnoMatrixLoader(
@@ -37,6 +39,7 @@ describe("AnnoMatrix", () => {
     });
 
     test("simple single column fetch", async () => {
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).once(serverMocks.annotationsObs(["name_0"]));
 
       const df = await annoMatrix.fetch("obs", "name_0");
@@ -46,6 +49,7 @@ describe("AnnoMatrix", () => {
     });
 
     test("simple multi column fetch", async () => {
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any)
         .once(serverMocks.annotationsObs(["name_0"]))
         .once(serverMocks.annotationsObs(["n_genes"]));
@@ -56,8 +60,10 @@ describe("AnnoMatrix", () => {
     });
 
     describe("fetch from field", () => {
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       const getLastTwo = async (field: any) => {
         const columnNames = annoMatrix.getMatrixColumns(field).slice(-2);
+        // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
         (fetch as any).mockResponses(
           ...columnNames.map(() => serverMocks.responder)
         );
@@ -73,18 +79,21 @@ describe("AnnoMatrix", () => {
 
     test("fetch - test all query forms", async () => {
       // single string is a column name
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).once(serverMocks.annotationsObs(["n_genes"]));
       await expect(annoMatrix.fetch("obs", "n_genes")).resolves.toBeInstanceOf(
         Dataframe
       );
 
       // array of column names, expecting n_genes to be cached.
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).once(serverMocks.annotationsObs(["percent_mito"]));
       await expect(
         annoMatrix.fetch("obs", ["n_genes", "percent_mito"])
       ).resolves.toBeInstanceOf(Dataframe);
 
       // more complex value filter query, enumerated
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).once(serverMocks.responder);
       await expect(
         annoMatrix.fetch("X", {
@@ -98,6 +107,7 @@ describe("AnnoMatrix", () => {
 
       // more complex value filter query, range
       const varIndex = annoMatrix.schema.annotations.var.index;
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any)
         .once(
           serverMocks.withExpected("/data/var", [[`var:${varIndex}`, "SUMO3"]])
@@ -174,6 +184,7 @@ describe("AnnoMatrix", () => {
       expect(am1.nObs).toEqual(am2.nObs);
       expect(am1.nVar).toEqual(am2.nVar);
 
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any)
         .once(serverMocks.annotationsObs(["n_genes"]))
         .once(serverMocks.annotationsObs(["n_genes"]));
@@ -191,6 +202,7 @@ describe("AnnoMatrix", () => {
     // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'base' implicitly has an 'any' type.
     async function addDrop(base) {
       expect(base.getMatrixColumns("obs")).not.toContain("foo");
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).mockRejectOnce(new Error("unknown column name"));
       await expect(base.fetch("obs", "foo")).rejects.toThrow(
         "unknown column name"
@@ -216,6 +228,7 @@ describe("AnnoMatrix", () => {
       const am2 = am1.dropObsColumn("foo");
       expect(base.getMatrixColumns("obs")).not.toContain("foo");
       expect(am2.getMatrixColumns("obs")).not.toContain("foo");
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).mockRejectOnce(new Error("unknown column name"));
       await expect(am2.fetch("obs", "foo")).rejects.toThrow(
         "unknown column name"
@@ -239,6 +252,7 @@ describe("AnnoMatrix", () => {
       const am4 = clip(am3, 0, 1);
       await addDrop(am4);
 
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).mockResponse(serverMocks.responder);
 
       await am1.fetch("obs", am1.getMatrixColumns("obs"));
@@ -246,6 +260,7 @@ describe("AnnoMatrix", () => {
       await am3.fetch("obs", am3.getMatrixColumns("obs"));
       await am4.fetch("obs", am4.getMatrixColumns("obs"));
 
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).resetMocks();
 
       await addDrop(am1);
@@ -292,6 +307,7 @@ describe("AnnoMatrix", () => {
       );
 
       /* drop column */
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).mockRejectOnce(new Error("unknown column name"));
       am = am1.dropObsColumn("test");
       await expect(am.fetch("obs", "test")).rejects.toThrow(
@@ -313,6 +329,7 @@ describe("AnnoMatrix", () => {
       const am3 = isubset(annoMatrix, [10, 1, 0, 30, 2]);
       await addSetDrop(am3);
 
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).mockResponse(serverMocks.responder);
 
       await am1.fetch("obs", am1.getMatrixColumns("obs"));

client/__tests__/util/annoMatrix/crossfilter.test.ts

@@ -17,10 +17,13 @@ import { rangeFill } from "../../../src/util/range";
 enableFetchMocks();
 
 describe("AnnoMatrixCrossfilter", () => {
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   let annoMatrix: any;
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   let crossfilter: any;
 
   beforeEach(async () => {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     (fetch as any).resetMocks(); // reset all fetch mocking state
     // reset all fetch mocking state
     annoMatrix = new AnnoMatrixLoader(
@@ -68,6 +71,7 @@ describe("AnnoMatrixCrossfilter", () => {
         crossfilter.obsCrossfilter.hasDimension("obs/louvain")
       ).toBeFalsy();
 
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).once(
         serverMocks.dataframeResponse(["louvain"], [obsLouvain])
       );
@@ -79,6 +83,7 @@ describe("AnnoMatrixCrossfilter", () => {
       expect(
         newCrossfilter.obsCrossfilter.hasDimension("obs/louvain")
       ).toBeTruthy();
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       expect((fetch as any).mock.calls).toHaveLength(1);
 
       newCrossfilter = await crossfilter.select("obs", "louvain", {
@@ -90,6 +95,7 @@ describe("AnnoMatrixCrossfilter", () => {
     test("simple column select", async () => {
       let xfltr;
 
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).once(
         serverMocks.dataframeResponse(["louvain"], [obsLouvain])
       );
@@ -130,10 +136,12 @@ describe("AnnoMatrixCrossfilter", () => {
       const values = df.col("louvain").asArray();
       const selected = xfltr.allSelectedMask();
       values.every(
+        // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
         (val: any, idx: any) =>
           !["NK cells", "B cells"].includes(val) !== !selected[idx]
       );
 
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).once(
         serverMocks.dataframeResponse(["n_genes"], [new Int32Array(obsNGenes)])
       );
@@ -168,6 +176,7 @@ describe("AnnoMatrixCrossfilter", () => {
       const varIndex = annoMatrix.schema.annotations.var.index;
 
       const { nObs } = annoMatrix.schema.dataframe;
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).once(
         serverMocks.dataframeResponse(
           ["TEST"],
@@ -205,14 +214,17 @@ describe("AnnoMatrixCrossfilter", () => {
       const values = df.icol(0).asArray();
       const selected = xfltr.allSelectedMask();
       values.every(
+        // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
         (val: any, idx: any) => !(val >= 0 && val <= 50) !== !selected[idx]
       );
       expect(
+        // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
         selected.reduce((acc: any, val: any) => (val ? acc + 1 : acc), 0)
       ).toEqual(xfltr.countSelected());
     });
 
     test("spatial column select", async () => {
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).once(
         serverMocks.dataframeResponse(
           ["umap_0", "umap_1"],
@@ -241,6 +253,7 @@ describe("AnnoMatrixCrossfilter", () => {
       let xfltr = new AnnoMatrixObsCrossfilter(annoMatrixSubset);
       expect(xfltr.countSelected()).toEqual(annoMatrixSubset.nObs);
 
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).once(
         serverMocks.dataframeResponse(["louvain"], [obsLouvain])
       );
@@ -256,6 +269,7 @@ describe("AnnoMatrixCrossfilter", () => {
       const values = df.col("louvain").asArray();
       const selected = xfltr.allSelectedMask();
       values.every(
+        // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
         (val: any, idx: any) =>
           !["NK cells", "B cells"].includes(val) !== !selected[idx]
       );
@@ -270,6 +284,7 @@ describe("AnnoMatrixCrossfilter", () => {
         "unable to obsSelect upon the var dimension"
       );
 
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).mockRejectOnce(new Error("unknown column name"));
       await expect(crossfilter.select("obs", "foo")).rejects.toThrow(
         "unknown column name"
@@ -281,6 +296,7 @@ describe("AnnoMatrixCrossfilter", () => {
     /*
     test the matrix mutators via crossfilter proxy
     */
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     async function helperAddTestCol(cf: any, colName: any, colSchema = null) {
       expect(
         cf.annoMatrix.getMatrixColumns("obs").includes(colName)
@@ -301,6 +317,7 @@ describe("AnnoMatrixCrossfilter", () => {
       const xfltr = cf.addObsColumn(colSchema, Array, initValue);
       expect(
         xfltr.annoMatrix.schema.annotations.obs.columns.filter(
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           (v: any) => v.name === colName
         )
       ).toHaveLength(1);
@@ -331,6 +348,7 @@ describe("AnnoMatrixCrossfilter", () => {
       });
       expect(
         xfltr.annoMatrix.schema.annotations.obs.columns.filter(
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           (v: any) => v.name === "foo"
         )
       ).toHaveLength(1);
@@ -340,7 +358,7 @@ describe("AnnoMatrixCrossfilter", () => {
       expect(
         df
           .col("foo")
-          .asArray()
+          .asArray() // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           .every((v: any) => v === "A")
       ).toBeTruthy();
 
@@ -378,10 +396,12 @@ describe("AnnoMatrixCrossfilter", () => {
       xfltr = xfltr.dropObsColumn("foo");
       expect(
         xfltr.annoMatrix.schema.annotations.obs.columns.filter(
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           (v: any) => v.name === "foo"
         )
       ).toHaveLength(0);
       expect(xfltr.annoMatrix.schema.annotations.obsByName.foo).toBeUndefined();
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).mockRejectOnce(new Error("unknown column name"));
       await expect(xfltr.annoMatrix.fetch("obs", "foo")).rejects.toThrow(
         "unknown column name"
@@ -395,6 +415,7 @@ describe("AnnoMatrixCrossfilter", () => {
       });
       xfltr = xfltr.dropObsColumn("bar");
 
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).mockRejectOnce(new Error("unknown column name"));
       await expect(xfltr.select("obs", "bar", { mode: "all" })).rejects.toThrow(
         "unknown column name"
@@ -421,6 +442,7 @@ describe("AnnoMatrixCrossfilter", () => {
         type: "categorical",
       });
 
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).mockRejectOnce(new Error("unknown column name"));
       await expect(xfltr.annoMatrix.fetch("obs", "foo")).rejects.toThrow(
         "unknown column name"
@@ -436,6 +458,7 @@ describe("AnnoMatrixCrossfilter", () => {
       });
       xfltr = xfltr.renameObsColumn("bar", "xyz");
 
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).mockRejectOnce(new Error("unknown column name"));
       await expect(xfltr.select("obs", "bar", { mode: "all" })).rejects.toThrow(
         "unknown column name"
@@ -446,6 +469,7 @@ describe("AnnoMatrixCrossfilter", () => {
     });
 
     test("addObsAnnoCategory", async () => {
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       let xfltr: any;
 
       // catch unknown or readonly columns
@@ -515,7 +539,7 @@ describe("AnnoMatrixCrossfilter", () => {
       expect(
         (await xfltr.annoMatrix.fetch("obs", "foo"))
           .col("foo")
-          .asArray()
+          .asArray() // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           .every((v: any) => v === "unassigned")
       ).toBeTruthy();
       expect(xfltr.annoMatrix.getColumnSchema("obs", "foo")).toMatchObject({
@@ -534,7 +558,7 @@ describe("AnnoMatrixCrossfilter", () => {
       expect(
         (await xfltr1.annoMatrix.fetch("obs", "foo"))
           .col("foo")
-          .asArray()
+          .asArray() // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           .every((v: any) => v === "unassigned")
       ).toBeTruthy();
       expect(xfltr1.annoMatrix.getColumnSchema("obs", "foo")).toMatchObject({
@@ -557,7 +581,7 @@ describe("AnnoMatrixCrossfilter", () => {
       expect(
         (await xfltr2.annoMatrix.fetch("obs", "foo"))
           .col("foo")
-          .asArray()
+          .asArray() // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           .every((v: any) => v === "red")
       ).toBeTruthy();
       expect(xfltr2.annoMatrix.getColumnSchema("obs", "foo")).toMatchObject({
@@ -593,7 +617,7 @@ describe("AnnoMatrixCrossfilter", () => {
       expect(
         (await xfltr.annoMatrix.fetch("obs", "foo"))
           .col("foo")
-          .asArray()
+          .asArray() // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           .every((v: any) => v === "unassigned")
       ).toBeTruthy();
       const xfltr1 = await xfltr.setObsColumnValues("foo", [0, 10], "purple");
@@ -602,6 +626,7 @@ describe("AnnoMatrixCrossfilter", () => {
           .col("foo")
           .asArray()
           .every(
+            // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
             (v: any, i: any) =>
               v === "unassigned" || (v === "purple" && (i === 0 || i === 10))
           )
@@ -660,7 +685,7 @@ describe("AnnoMatrixCrossfilter", () => {
       expect(
         (await xfltr1.annoMatrix.fetch("obs", "foo"))
           .col("foo")
-          .asArray()
+          .asArray() // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           .filter((v: any) => v === "purple")
       ).toHaveLength(2);
 
@@ -668,13 +693,13 @@ describe("AnnoMatrixCrossfilter", () => {
       expect(
         (await xfltr1.annoMatrix.fetch("obs", "foo"))
           .col("foo")
-          .asArray()
+          .asArray() // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           .filter((v: any) => v === "magenta")
       ).toHaveLength(2);
       expect(
         (await xfltr1.annoMatrix.fetch("obs", "foo"))
           .col("foo")
-          .asArray()
+          .asArray() // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           .filter((v: any) => v === "purple")
       ).toHaveLength(0);
       expect(xfltr1.annoMatrix.getColumnSchema("obs", "foo")).toMatchObject({
@@ -695,6 +720,7 @@ describe("AnnoMatrixCrossfilter", () => {
   describe("edge cases", () => {
     test("transition from empty annoMatrix", async () => {
       // select before fetch needs to work
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (fetch as any).once(
         serverMocks.dataframeResponse(["louvain"], [obsLouvain])
       );
@@ -702,6 +728,7 @@ describe("AnnoMatrixCrossfilter", () => {
         mode: "exact",
         values: "B cells",
       });
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       expect((fetch as any).mock.calls).toHaveLength(1);
       expect(xfltr.obsCrossfilter.hasDimension("obs/louvain")).toBeTruthy();
       expect(xfltr.obsCrossfilter.all()).toBe(xfltr.annoMatrix._cache.obs);

client/__tests__/util/annoMatrix/serverMocks/index.ts

@@ -1,5 +1,6 @@
 export const baseDataURL = "https://a.fake.url/api/v0.2";
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 (window as any).CELLXGENE = {
   API: {
     prefix: baseDataURL,

client/__tests__/util/annoMatrix/serverMocks/routes.ts

@@ -14,6 +14,7 @@ const indexedSchema = {
   ),
 };
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function makeMockColumn(s: any, length: any) {
   const { type } = s;
   switch (type) {
@@ -37,8 +38,10 @@ function makeMockColumn(s: any, length: any) {
   }
 }
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function getEncodedDataframe(colNames: any, length: any, colSchemas: any) {
   const colIndex = new KeyIndex(colNames);
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   const columns = colSchemas.map((s: any) => makeMockColumn(s, length));
   // @ts-expect-error ts-migrate(2345) FIXME: Argument of type 'KeyIndex' is not assignable to p... Remove this comment to see the full error message
   const df = new Dataframe([length, colNames.length], columns, null, colIndex);
@@ -46,6 +49,7 @@ function getEncodedDataframe(colNames: any, length: any, colSchemas: any) {
   return body;
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export function dataframeResponse(colNames: any, columns: any) {
   const colIndex = new KeyIndex(colNames);
   const df = new Dataframe(
@@ -62,8 +66,10 @@ export function dataframeResponse(colNames: any, columns: any) {
   return () => Promise.resolve({ body, init: { status: 200, headers } });
 }
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function annotationObsResponse(request: any) {
   const url = new URL(request.url);
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   const params = Array.from((url.searchParams as any).entries());
   const names = params
     // @ts-expect-error ts-migrate(2769) FIXME: No overload matches this call.
@@ -91,8 +97,10 @@ function annotationObsResponse(request: any) {
   });
 }
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function annotationVarResponse(request: any) {
   const url = new URL(request.url);
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   const params = Array.from((url.searchParams as any).entries());
   const names = params
     // @ts-expect-error ts-migrate(2769) FIXME: No overload matches this call.
@@ -120,8 +128,10 @@ function annotationVarResponse(request: any) {
   });
 }
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function layoutObsResponse(request: any) {
   const url = new URL(request.url);
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   const params = Array.from((url.searchParams as any).entries());
   // @ts-expect-error ts-migrate(2769) FIXME: No overload matches this call.
   const names = params.filter(([k]) => k === "layout-name").map(([, v]) => v);
@@ -150,10 +160,13 @@ function layoutObsResponse(request: any) {
   });
 }
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function dataVarResponse(request: any) {
   const url = new URL(request.url);
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   const params = Array.from((url.searchParams as any).entries());
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   const colNames = params.map((v) => `${(v as any)[0]}/${(v as any)[1]}`);
   const colSchemas = colNames.map(() => schema.schema.dataframe);
   const body = getEncodedDataframe(
@@ -171,6 +184,7 @@ function dataVarResponse(request: any) {
   });
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export function responder(request: any) {
   const url = new URL(request.url);
   const { pathname } = url;
@@ -189,29 +203,34 @@ export function responder(request: any) {
   return Promise.reject(new Error("bad URL"));
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export function withExpected(expectedURL: any, expectedParams: any) {
   /*
   Do some additional error checking
   */
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   return (request: any) => {
     // if URL is bogus, reject the promise
     const url = new URL(request.url);
     if (!url.pathname.endsWith(expectedURL)) {
       return Promise.reject(new Error("Unexpected URL!"));
     }
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     const params = Array.from((url.searchParams as any).entries()).sort(
       // @ts-expect-error ts-migrate(2345) FIXME: Argument of type '(a: unknown, b: unknown) => bool... Remove this comment to see the full error message
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (a, b) => (a as any)[0] < (b as any)[0]
     );
     expectedParams = expectedParams
-      .slice()
+      .slice() // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       .sort((a: any, b: any) => a[0] < b[0]);
 
     if (
       params.length !== expectedParams.length ||
       !params.every(
         (p, i) =>
-          (p as any)[0] === expectedParams[i][0] &&
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
+          (p as any)[0] === expectedParams[i][0] && // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           (p as any)[1] === expectedParams[i][1]
       )
     ) {
@@ -222,9 +241,11 @@ export function withExpected(expectedURL: any, expectedParams: any) {
   };
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export function annotationsObs(names: any) {
   return withExpected(
     "/annotations/obs",
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     names.map((name: any) => ["annotation-name", name])
   );
 }

client/__tests__/util/annoMatrix/whereCache.test.ts

@@ -219,13 +219,16 @@ describe("whereCache", () => {
       })
     );
     // @ts-expect-error ts-migrate(2531) FIXME: Object is possibly 'null'.
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     expect((wc.where as any).field.queryField.has("queryColumn")).toEqual(true);
     expect(
       // @ts-expect-error ts-migrate(2531) FIXME: Object is possibly 'null'.
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (wc.where as any).field.queryField.get("queryColumn")
     ).toBeInstanceOf(Map);
     expect(
       // @ts-expect-error ts-migrate(2531) FIXME: Object is possibly 'null'.
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (wc.where as any).field.queryField.get("queryColumn").has("queryValue")
     ).toEqual(true);
     expect(_whereCacheGet(wc, schema, "field", query)).toEqual([0, 1, 2]);

client/__tests__/util/centroid.test.ts

@@ -8,8 +8,11 @@ import { indexEntireSchema } from "../../src/util/stateManager/schemaHelpers";
 import { _normalizeCategoricalSchema } from "../../src/annoMatrix/schema";
 
 describe("centroid", () => {
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   let schema: any;
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   let obsAnnotations: any;
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   let obsLayout: any;
 
   beforeAll(() => {
@@ -44,6 +47,7 @@ describe("centroid", () => {
       quantile([0.5], obsLayout.col("umap_1").asArray())[0],
     ];
 
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     centroidResult.forEach((coordinate: any) => {
       expect(coordinate).toEqual(expectedResult);
     });
@@ -68,6 +72,7 @@ describe("centroid", () => {
       quantile([0.5], obsLayout.col("umap_1").asArray())[0],
     ];
 
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     centroidResult.forEach((coordinate: any) => {
       expect(coordinate).toEqual(expectedResult);
     });

client/__tests__/util/dataframe/dataframe.test.ts

@@ -811,6 +811,7 @@ describe("dataframe factories", () => {
           new Float64Array(3).fill(1.1),
         ]
       );
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       const dfB = dfA.mapColumns((col: any, idx: any) => {
         expect(dfA.icol(idx).asArray()).toBe(col);
         return col;
@@ -869,6 +870,7 @@ describe("dataframe factories", () => {
 });
 
 describe("dataframe col", () => {
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   let df: any = null;
   beforeEach(() => {
     df = new Dataframe.Dataframe(

client/__tests__/util/dataframe/summarize.test.ts

@@ -1,5 +1,6 @@
 import * as Dataframe from "../../../src/util/dataframe";
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function float32Conversion(f: any) {
   return new Float32Array([f])[0];
 }

client/__tests__/util/promiseLimit.test.ts

@@ -1,6 +1,7 @@
 import PromiseLimit from "../../src/util/promiseLimit";
 import { range } from "../../src/util/range";
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 const delay = (t: any) => new Promise((resolve) => setTimeout(resolve, t));
 
 describe("PromiseLimit", () => {
@@ -52,6 +53,7 @@ describe("PromiseLimit", () => {
     };
 
     // @ts-expect-error ts-migrate(2554) FIXME: Expected 3 arguments, but got 1.
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     await Promise.all(range(10).map((i: any) => plimit.add(() => callback(i))));
 
     expect(maxRunning).toEqual(2);

client/__tests__/util/stateManager/colorHelpers.test.ts

@@ -125,6 +125,7 @@ describe("categorical color helpers", () => {
       Array.from(schema.annotations.obsByName.categoricalColumn.categories)
     );
     const userDefinedColorTable = {
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       categoricalColumn: shuffleCats.reduce((acc: any, label: any) => {
         acc[label] = randRGBColor();
         return acc;
@@ -159,23 +160,29 @@ TODO:
 2. user defined colors
 */
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function indexSchema(schema: any) {
   schema.annotations.obsByName = Object.fromEntries(
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     schema.annotations?.obs?.columns?.map((v: any) => [v.name, v]) ?? []
   );
   schema.annotations.varByName = Object.fromEntries(
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     schema.annotations?.var?.columns?.map((v: any) => [v.name, v]) ?? []
   );
   schema.layout.obsByName = Object.fromEntries(
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     schema.layout?.obs?.map((v: any) => [v.name, v]) ?? []
   );
   schema.layout.varByName = Object.fromEntries(
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     schema.layout?.var?.map((v: any) => [v.name, v]) ?? []
   );
 
   return schema;
 }
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function makeScale(rgb: any) {
   // make a scale string from a rgb float triple
   return `rgb(${(rgb[0] * 255) >>> 0}, ${(rgb[1] * 255) >>> 0}, ${
@@ -183,6 +190,7 @@ function makeScale(rgb: any) {
   })`;
 }
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function shuffle(array: any) {
   for (let i = array.length - 1; i > 0; i -= 1) {
     const j = (Math.random() * (i + 1)) >>> 0;

client/__tests__/util/stateManager/sampleResponses.ts

@@ -107,8 +107,11 @@ const anAnnotationsVarJSONResponse = {
     .value(),
 };
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function encodeTypedArray(builder: any, uType: any, uData: any) {
+  // @ts-expect-error --- FIXME: Element implicitly has an 'any' type.
   const uTypeName = NetEncoding.TypedArray[uType];
+  // @ts-expect-error --- FIXME: Element implicitly has an 'any' type.
   const ArrayType = NetEncoding[uTypeName];
   const dv = ArrayType.createDataVector(builder, uData);
   builder.startObject(1);
@@ -116,6 +119,7 @@ function encodeTypedArray(builder: any, uType: any, uData: any) {
   return builder.endObject();
 }
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function encodeMatrix(columns: any, colIndex = undefined) {
   /*
   IMPORTANT: this is not a general purpose encoder.  in particular,

client/__tests__/util/typedCrossfilter/crossfilter.test.ts

@@ -126,6 +126,7 @@ const someData = [
   },
 ];
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 let payments: any = null;
 beforeEach(() => {
   payments = new Crossfilter(someData);
@@ -141,6 +142,7 @@ describe("ImmutableTypedCrossfilter", () => {
       .addDimension(
         "quantity",
         "scalar",
+        // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
         (i: any, d: any) => d[i].quantity,
         Int32Array
       )
@@ -163,6 +165,7 @@ describe("ImmutableTypedCrossfilter", () => {
     const p2 = payments.addDimension(
       "quantity",
       "scalar",
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (i: any, data: any) => data[i].quantity,
       Int32Array
     );
@@ -183,16 +186,18 @@ describe("ImmutableTypedCrossfilter", () => {
       .addDimension(
         "quantity",
         "scalar",
+        // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
         (i: any, d: any) => d[i].quantity,
         Int32Array
-      )
+      ) // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       .addDimension("tip", "scalar", (i: any, d: any) => d[i].tip, Float32Array)
       .addDimension(
         "total",
         "scalar",
+        // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
         (i: any, d: any) => d[i].total,
         Float32Array
-      )
+      ) // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       .addDimension("type", "enum", (i: any, d: any) => d[i].type);
     expect(p).toBeDefined();
 
@@ -245,18 +250,21 @@ describe("ImmutableTypedCrossfilter", () => {
   });
 
   describe("scalar dimension", () => {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     let p: any;
     beforeEach(() => {
       p = payments
         .addDimension(
           "quantity",
           "scalar",
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           (i: any, d: any) => d[i].quantity,
           Int32Array
         )
         .addDimension(
           "tip",
           "scalar",
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           (i: any, d: any) => d[i].tip,
           Float32Array
         )
@@ -302,8 +310,10 @@ describe("ImmutableTypedCrossfilter", () => {
   });
 
   describe("enum dimension", () => {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     let p: any;
     beforeEach(() => {
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       p = payments.addDimension("type", "enum", (i: any, d: any) => d[i].type);
     });
 
@@ -342,6 +352,7 @@ describe("ImmutableTypedCrossfilter", () => {
   });
 
   describe("spatial dimension", () => {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     let p: any;
     beforeEach(() => {
       const X = someData.map((r) => r.coords[0]);
@@ -431,18 +442,21 @@ describe("ImmutableTypedCrossfilter", () => {
   });
 
   describe("non-finite scalars", () => {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     let p: any;
     beforeEach(() => {
       p = payments
         .addDimension(
           "quantity",
           "scalar",
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           (i: any, d: any) => d[i].quantity,
           Int32Array
         )
         .addDimension(
           "nonFinite",
           "scalar",
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           (i: any, d: any) => d[i].nonFinite,
           Float32Array
         )

client/__tests__/util/typedCrossfilter/sort.test.ts

@@ -15,6 +15,7 @@ paths for:
 const pInf = Number.POSITIVE_INFINITY;
 const nInf = Number.NEGATIVE_INFINITY;
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function fillRange(arr: any, start = 0) {
   const larr = arr;
   for (let i = 0, len = larr.length; i < len; i += 1) {
@@ -23,6 +24,7 @@ function fillRange(arr: any, start = 0) {
   return larr;
 }
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function fillRand(arr: any) {
   for (let i = 0, len = arr.length; i < len; i += 1) {
     arr[i] = Math.random();
@@ -140,6 +142,7 @@ describe("sortIndex", () => {
         const source1 = Type.from([6, 5, 4, 3, 2, 1, 0]);
         const index1 = fillRange(new Uint32Array(source1.length));
         expect(sortIndex(index1, source1)).toMatchObject(
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           index1.sort((a: any, b: any) => source1[a] - source1[b])
         );
 
@@ -147,12 +150,14 @@ describe("sortIndex", () => {
         const source2 = Type.from([6, 5, 4, 3, 2, 1]);
         const index2 = fillRange(new Uint32Array(source2.length));
         expect(sortIndex(index2, source2)).toMatchObject(
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           index2.sort((a: any, b: any) => source1[a] - source1[b])
         );
 
         const source3 = fillRand(new Type(1000));
         const index3 = fillRange(new Uint32Array(source3.length));
         expect(sortIndex(index3, source3)).toMatchObject(
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           index3.sort((a: any, b: any) => source1[a] - source1[b])
         );
       })

client/configuration/babel/babel.prod.js

@@ -10,6 +10,7 @@ module.exports = {
       },
     ],
     "@babel/preset-react",
+    // eslint-disable-next-line prettier/prettier --- FIXME: disabled temporarily on migrate to TS.
     "@babel/preset-typescript"
   ],
   plugins: [

client/configuration/eslint/eslint.js

@@ -1,8 +1,10 @@
+/* eslint-disable @blueprintjs/classes-constants -- we don't import blueprint here  */
 module.exports = {
   root: true,
   parser: "@typescript-eslint/parser",
   extends: [
     "airbnb-typescript",
+    "plugin:@typescript-eslint/recommended",
     "plugin:eslint-comments/recommended",
     "plugin:@blueprintjs/recommended",
     "plugin:compat/recommended",
@@ -115,3 +117,4 @@ module.exports = {
     },
   ],
 };
+/* eslint-enable @blueprintjs/classes-constants -- we don't import blueprint here  */

client/configuration/webpack/cspHashPlugin.js

@@ -1,6 +1,10 @@
 /* eslint-disable import/no-extraneous-dependencies -- this file is a devDependency*/
+/* eslint-disable @blueprintjs/classes-constants -- we don't import blueprint here  */
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const cheerio = require("cheerio");
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const crypto = require("crypto");
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const HtmlWebpackPlugin = require("html-webpack-plugin");
 
 const digest = (str) => {
@@ -50,4 +54,5 @@ class CspHashPlugin {
 }
 
 module.exports = CspHashPlugin;
+/* eslint-enable @blueprintjs/classes-constants -- we don't import blueprint here  */
 /* eslint-enable import/no-extraneous-dependencies -- enable*/

client/configuration/webpack/webpack.config.dev.js

@@ -1,13 +1,23 @@
+/* eslint-disable @blueprintjs/classes-constants -- we don't import blueprint here  */
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const path = require("path");
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const webpack = require("webpack");
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const HtmlWebpackPlugin = require("html-webpack-plugin");
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const FaviconsWebpackPlugin = require("favicons-webpack-plugin");
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const ScriptExtHtmlWebpackPlugin = require("script-ext-html-webpack-plugin");
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const MiniCssExtractPlugin = require("mini-css-extract-plugin");
 
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const { merge } = require("webpack-merge");
 
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const sharedConfig = require("./webpack.config.shared");
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const babelOptions = require("../babel/babel.dev");
 
 const fonts = path.resolve("src/fonts");
@@ -83,3 +93,4 @@ const devConfig = {
 };
 
 module.exports = merge(sharedConfig, devConfig);
+/* eslint-enable @blueprintjs/classes-constants -- we don't import blueprint here  */

client/configuration/webpack/webpack.config.prod.js

@@ -1,18 +1,31 @@
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const path = require("path");
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const webpack = require("webpack");
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const HtmlWebpackPlugin = require("html-webpack-plugin");
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const { CleanWebpackPlugin } = require("clean-webpack-plugin");
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const TerserJSPlugin = require("terser-webpack-plugin");
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const CleanCss = require("clean-css");
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const OptimizeCSSAssetsPlugin = require("optimize-css-assets-webpack-plugin");
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const FaviconsWebpackPlugin = require("favicons-webpack-plugin");
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const MiniCssExtractPlugin = require("mini-css-extract-plugin");
 
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const { merge } = require("webpack-merge");
 
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const babelOptions = require("../babel/babel.prod");
 
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const CspHashPlugin = require("./cspHashPlugin");
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const sharedConfig = require("./webpack.config.shared");
 
 const fonts = path.resolve("src/fonts");

client/configuration/webpack/webpack.config.shared.js

@@ -1,8 +1,13 @@
+/* eslint-disable @blueprintjs/classes-constants -- we don't import blueprint here  */
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const path = require("path");
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const fs = require("fs");
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const MiniCssExtractPlugin = require("mini-css-extract-plugin");
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const ObsoleteWebpackPlugin = require("obsolete-webpack-plugin");
-// eslint-disable-next-line @blueprintjs/classes-constants -- incorrect match
+// eslint-disable-next-line @typescript-eslint/no-var-requires --- FIXME: disabled temporarily on migrate to TS.
 const ScriptExtHtmlWebpackPlugin = require("script-ext-html-webpack-plugin");
 
 const src = path.resolve("src");
@@ -75,3 +80,4 @@ module.exports = {
     }),
   ],
 };
+/* eslint-enable @blueprintjs/classes-constants -- we don't import blueprint here  */

client/src/actions/annotation.ts

@@ -9,8 +9,11 @@ import { MatrixFBS, AnnotationsHelpers } from "../util/stateManager";
 const { isUserAnnotation } = AnnotationsHelpers;
 
 export const annotationCreateCategoryAction = (
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   newCategoryName: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   categoryToDuplicate: any
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 ) => async (dispatch: any, getState: any) => {
   /*
   Add a new user-created category to the obs annotations.
@@ -89,8 +92,11 @@ export const annotationCreateCategoryAction = (
 };
 
 export const annotationRenameCategoryAction = (
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   oldCategoryName: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   newCategoryName: any
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 ) => (dispatch: any, getState: any) => {
   /*
   Rename a user-created annotation category
@@ -124,8 +130,11 @@ export const annotationRenameCategoryAction = (
   });
 };
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export const annotationDeleteCategoryAction = (categoryName: any) => (
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   dispatch: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   getState: any
 ) => {
   /*
@@ -149,9 +158,12 @@ export const annotationDeleteCategoryAction = (categoryName: any) => (
 };
 
 export const annotationCreateLabelInCategory = (
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   categoryName: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   labelName: any,
-  assignSelected: any
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
+  assignSelected: any // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 ) => async (dispatch: any, getState: any) => {
   /*
   Add a new label to a user-defined category.  If assignSelected is true, assign
@@ -188,8 +200,10 @@ export const annotationCreateLabelInCategory = (
 };
 
 export const annotationDeleteLabelFromCategory = (
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   categoryName: any,
-  labelName: any
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
+  labelName: any // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 ) => async (dispatch: any, getState: any) => {
   /*
   delete a label from a user-defined category
@@ -218,9 +232,13 @@ export const annotationDeleteLabelFromCategory = (
 };
 
 export const annotationRenameLabelInCategory = (
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   categoryName: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   oldLabelName: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   newLabelName: any
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 ) => async (dispatch: any, getState: any) => {
   /*
   label name change
@@ -255,8 +273,11 @@ export const annotationRenameLabelInCategory = (
 };
 
 export const annotationLabelCurrentSelection = (
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   categoryName: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   labelName: any
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 ) => async (dispatch: any, getState: any) => {
   /*
   set the label on all currently selected
@@ -284,14 +305,22 @@ export const annotationLabelCurrentSelection = (
   });
 };
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function writableAnnotations(annoMatrix: any) {
-  return annoMatrix.schema.annotations.obs.columns
+  return (
-    .filter((s: any) => s.writable)
+    annoMatrix.schema.annotations.obs.columns
-    .map((s: any) => s.name);
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
+      .filter((s: any) => s.writable)
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
+      .map((s: any) => s.name)
+  );
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
 export const needToSaveObsAnnotations = (
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   annoMatrix: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   lastSavedAnnoMatrix: any
 ) => {
   /*
@@ -317,12 +346,16 @@ export const needToSaveObsAnnotations = (
 
   // no schema changes; check for change in contents
   return currentWritable.some(
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     (col: any) => annoMatrix.col(col) !== lastSavedAnnoMatrix.col(col)
   );
 };
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
 export const saveObsAnnotationsAction = () => async (
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   dispatch: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   getState: any
 ) => {
   /*
@@ -394,8 +427,11 @@ export const saveObsAnnotationsAction = () => async (
   }
 };
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
 export const saveGenesetsAction = () => async (
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   dispatch: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   getState: any
 ) => {
   const state = getState();

client/src/actions/embedding.ts

@@ -5,9 +5,13 @@ action creators related to embeddings choice
 import { AnnoMatrixObsCrossfilter } from "../annoMatrix";
 import { _setEmbeddingSubset } from "../util/stateManager/viewStackHelpers";
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
 export async function _switchEmbedding(
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   prevAnnoMatrix: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   prevCrossfilter: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   newEmbeddingName: any
 ) {
   /*
@@ -25,8 +29,11 @@ export async function _switchEmbedding(
   return [annoMatrix, obsCrossfilter];
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export const layoutChoiceAction = (newLayoutChoice: any) => async (
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   dispatch: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   getState: any
 ) => {
   /*

client/src/actions/geneset.ts

@@ -21,8 +21,11 @@ The behavior manifest in these action creators:
 Note that crossfilter indices are lazy created, as needed.
 */
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export const genesetDelete = (genesetName: any) => (
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   dispatch: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   getState: any
 ) => {
   const state = getState();
@@ -43,8 +46,11 @@ export const genesetDelete = (genesetName: any) => (
   });
 };
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export const genesetAddGenes = (genesetName: any, genes: any) => async (
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   dispatch: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   getState: any
 ) => {
   const state = getState();
@@ -53,6 +59,7 @@ export const genesetAddGenes = (genesetName: any, genes: any) => async (
   const varIndex = schema.annotations.var.index;
   const df = await annoMatrix.fetch("var", varIndex);
   const geneNames = df.col(varIndex).asArray();
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   genes = genes.reduce((acc: any, gene: any) => {
     if (geneNames.indexOf(gene.geneSymbol) === -1) {
       postUserErrorToast(
@@ -81,8 +88,11 @@ export const genesetAddGenes = (genesetName: any, genes: any) => async (
   });
 };
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export const genesetDeleteGenes = (genesetName: any, geneSymbols: any) => (
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   dispatch: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   getState: any
 ) => {
   const state = getState();
@@ -101,8 +111,11 @@ Private
 */
 
 function dropGenesetSummaryDimension(
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   obsCrossfilter: any,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   state: any,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   genesetName: any
 ) {
   const { annoMatrix, genesets } = state;
@@ -120,6 +133,7 @@ function dropGenesetSummaryDimension(
   return obsCrossfilter.dropDimension("X", query);
 }
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function dropGeneDimension(obsCrossfilter: any, state: any, gene: any) {
   const { annoMatrix } = state;
   const varIndex = annoMatrix.schema.annotations?.var?.index;
@@ -134,13 +148,18 @@ function dropGeneDimension(obsCrossfilter: any, state: any, gene: any) {
 }
 
 function dropGeneset(
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   dispatch: any,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   state: any,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   genesetName: any,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   geneSymbols: any
 ) {
   const { obsCrossfilter: prevObsCrossfilter } = state;
   const obsCrossfilter = geneSymbols.reduce(
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     (crossfilter: any, gene: any) =>
       dropGeneDimension(crossfilter, state, gene),
     dropGenesetSummaryDimension(prevObsCrossfilter, state, genesetName)
@@ -150,6 +169,7 @@ function dropGeneset(
     continuousNamespace: { isGeneSetSummary: true },
     selection: genesetName,
   });
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   geneSymbols.forEach((g: any) =>
     dispatch({
       type: "continuous metadata histogram cancel",

client/src/actions/index.ts

@@ -15,6 +15,7 @@ import * as genesetActions from "./geneset";
 /*
 return promise fetching user-configured colors
 */
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 async function userColorsFetchAndLoad(dispatch: any) {
   return fetchJson("colors").then((response) =>
     dispatch({
@@ -28,6 +29,7 @@ async function schemaFetch() {
   return fetchJson("schema");
 }
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 async function configFetch(dispatch: any) {
   return fetchJson("config").then((response) => {
     const config = { ...globals.configDefaults, ...response.config };
@@ -39,6 +41,7 @@ async function configFetch(dispatch: any) {
   });
 }
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 async function userInfoFetch(dispatch: any) {
   return fetchJson("userinfo").then((response) => {
     const { userinfo: userInfo } = response || {};
@@ -50,6 +53,7 @@ async function userInfoFetch(dispatch: any) {
   });
 }
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 async function genesetsFetch(dispatch: any, config: any) {
   /* request genesets ONLY if the backend supports the feature */
   const defaultResponse = {
@@ -71,19 +75,24 @@ async function genesetsFetch(dispatch: any, config: any) {
   }
 }
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function prefetchEmbeddings(annoMatrix: any) {
   /*
   prefetch requests for all embeddings
   */
   const { schema } = annoMatrix;
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   const available = schema.layout.obs.map((v: any) => v.name);
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   available.forEach((embName: any) => annoMatrix.prefetch("emb", embName));
 }
 
 /*
 Application bootstrap
 */
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
 const doInitialDataLoad = () =>
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   catchErrorsWrap(async (dispatch: any) => {
     dispatch({ type: "initial data load start" });
 
@@ -114,6 +123,7 @@ const doInitialDataLoad = () =>
       const layoutSchema = schema?.schema?.layout?.obs ?? [];
       if (
         defaultEmbedding &&
+        // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
         layoutSchema.some((s: any) => s.name === defaultEmbedding)
       ) {
         dispatch(embActions.layoutChoiceAction(defaultEmbedding));
@@ -123,6 +133,7 @@ const doInitialDataLoad = () =>
     }
   }, true);
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 function requestSingleGeneExpressionCountsForColoringPOST(gene: any) {
   return {
     type: "color by expression",
@@ -130,6 +141,7 @@ function requestSingleGeneExpressionCountsForColoringPOST(gene: any) {
   };
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 const requestUserDefinedGene = (gene: any) => ({
   type: "request user defined gene success",
 
@@ -138,6 +150,7 @@ const requestUserDefinedGene = (gene: any) => ({
   },
 });
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 const dispatchDiffExpErrors = (dispatch: any, response: any) => {
   switch (response.status) {
     case 403:
@@ -162,9 +175,12 @@ const dispatchDiffExpErrors = (dispatch: any, response: any) => {
 };
 
 const requestDifferentialExpression = (
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   set1: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   set2: any,
   num_genes = 50
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 ) => async (dispatch: any, getState: any) => {
   dispatch({ type: "request differential expression started" });
   try {
@@ -214,6 +230,7 @@ const requestDifferentialExpression = (
     const diffexpLists = { negative: [], positive: [] };
     for (const polarity of Object.keys(diffexpLists)) {
       // @ts-expect-error ts-migrate(7053) FIXME: Element implicitly has an 'any' type because expre... Remove this comment to see the full error message
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       diffexpLists[polarity] = response[polarity].map((v: any) => [
         varIndex.at(v[0], varIndexName),
         ...v.slice(1),
@@ -233,6 +250,7 @@ const requestDifferentialExpression = (
   }
 };
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function fetchJson(pathAndQuery: any) {
   return doJsonRequest(
     `${globals.API.prefix}${globals.API.version}${pathAndQuery}`

client/src/actions/selection.ts

@@ -2,10 +2,13 @@
 Action creators for selection 
 */
 export const selectContinuousMetadataAction = (
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   type: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   query: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   range: any,
-  oldProps = {}
+  oldProps = {} // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 ) => async (dispatch: any, getState: any) => {
   const { obsCrossfilter: prevObsCrossfilter } = getState();
 
@@ -29,12 +32,21 @@ export const selectContinuousMetadataAction = (
 };
 
 export const selectCategoricalMetadataAction = (
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   type: any, // action type
-  metadataField: any, // annotation category name
+  // annotation category name
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
+  metadataField: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   labels: any,
-  label: any, // the label being selected/deselected
+  // the label being selected/deselected
-  isSelected: any, // bool
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
+  label: any,
+  // bool
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
+  isSelected: any,
   oldProps = {}
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 ) => async (dispatch: any, getState: any) => {
   const {
     obsCrossfilter: prevObsCrossfilter,
@@ -43,6 +55,7 @@ export const selectCategoricalMetadataAction = (
 
   const labelSelectionState = new Map(categoricalSelection[metadataField]);
   labels.forEach(
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     (l: any) => labelSelectionState.has(l) || labelSelectionState.set(l, true)
   );
   labelSelectionState.set(label, isSelected);
@@ -70,11 +83,18 @@ export const selectCategoricalMetadataAction = (
 };
 
 export const selectCategoricalAllMetadataAction = (
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   type: any, // action type
-  metadataField: any, // annotation category name
+  // annotation category name
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
+  metadataField: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   labels: any,
-  isSelected: any, // bool, select all or none
+  // bool, select all or none
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
+  isSelected: any,
   oldProps = {}
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 ) => async (dispatch: any, getState: any) => {
   const {
     obsCrossfilter: prevObsCrossfilter,
@@ -82,6 +102,7 @@ export const selectCategoricalAllMetadataAction = (
   } = getState();
 
   const labelSelectionState = new Map(categoricalSelection[metadataField]);
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   labels.forEach((label: any) => labelSelectionState.set(label, isSelected));
 
   const selection = { mode: isSelected ? "all" : "none" };
@@ -104,14 +125,19 @@ export const selectCategoricalAllMetadataAction = (
  ** Graph selection-related actions
  **/
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
 export const graphBrushStartAction = () =>
   /* no change to crossfilter until a change fires */
   ({ type: "graph brush start" });
 
 const _graphBrushWithinRectAction = (
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   type: any,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   embName: any,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   brushCoords: any
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 ) => async (dispatch: any, getState: any) => {
   const { obsCrossfilter: prevObsCrossfilter } = getState();
 
@@ -129,8 +155,11 @@ const _graphBrushWithinRectAction = (
   });
 };
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 const _graphAllAction = (type: any, embName: any) => async (
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   dispatch: any,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   getState: any
 ) => {
   const { obsCrossfilter: prevObsCrossfilter } = getState();
@@ -145,29 +174,39 @@ const _graphAllAction = (type: any, embName: any) => async (
   });
 };
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export const graphBrushChangeAction = (embName: any, brushCoords: any) =>
   _graphBrushWithinRectAction("graph brush change", embName, brushCoords);
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export const graphBrushEndAction = (embName: any, brushCoords: any) =>
   _graphBrushWithinRectAction("graph brush end", embName, brushCoords);
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export const graphBrushCancelAction = (embName: any) =>
   _graphAllAction("graph brush cancel", embName);
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export const graphBrushDeselectAction = (embName: any) =>
   _graphAllAction("graph brush deselect", embName);
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
 export const graphLassoStartAction = () =>
   /* no change to crossfilter until a change fires */
   ({ type: "graph lasso start" });
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export const graphLassoCancelAction = (embName: any) =>
   _graphAllAction("graph lasso cancel", embName);
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export const graphLassoDeselectAction = (embName: any) =>
   _graphAllAction("graph lasso cancel", embName);
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export const graphLassoEndAction = (embName: any, polygon: any) => async (
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   dispatch: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   getState: any
 ) => {
   const { obsCrossfilter: prevObsCrossfilter } = getState();
@@ -192,8 +231,11 @@ export const graphLassoEndAction = (embName: any, polygon: any) => async (
 /*
 Differential expression set selection
 */
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export const setCellSetFromSelection = (cellSetId: any) => (
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   dispatch: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   getState: any
 ) => {
   const { obsCrossfilter } = getState();

client/src/actions/viewStack.ts

@@ -18,8 +18,11 @@ import {
   _userResetSubsetAnnoMatrix,
 } from "../util/stateManager/viewStackHelpers";
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export const clipAction = (min: any, max: any) => (
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   dispatch: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   getState: any
 ) => {
   /*
@@ -37,6 +40,7 @@ export const clipAction = (min: any, max: any) => (
   });
 };
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export const subsetAction = () => (dispatch: any, getState: any) => {
   /*
   Subset the annoMatrix to the current crossfilter selection by pushing a 
@@ -61,6 +65,7 @@ export const subsetAction = () => (dispatch: any, getState: any) => {
   });
 };
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export const resetSubsetAction = () => (dispatch: any, getState: any) => {
   /*
   Reset the annoMatrix to all data.  Because we may have multiple views

client/src/annoMatrix/annoMatrix.ts

@@ -17,26 +17,37 @@ import { _queryValidate, _queryCacheKey } from "./query";
 const _dataframeCache = dataframeMemo(128);
 
 export default class AnnoMatrix {
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   public isView: any;
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   public nObs: any;
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   public nVar: any;
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   public rowIndex: any;
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   public schema: any;
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   public userFlags: any;
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   public viewOf: any;
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   protected _cache: any;
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   private _pendingLoad: any;
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   private _whereCache: any;
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   private _gcInfo: any;
 
   /*
@@ -69,6 +80,7 @@ export default class AnnoMatrix {
       subset(annoMatrix, rowLabels) -> annoMatrix
   etc.
   */
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   static fields() {
     /*
     return the fields present in the AnnoMatrix instance.
@@ -76,6 +88,7 @@ export default class AnnoMatrix {
     return ["obs", "var", "emb", "X"];
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   constructor(schema: any, nObs: any, nVar: any, rowIndex = null) {
     /*
     Private constructor - this is an abstract base class.  Do not use.
@@ -132,6 +145,7 @@ export default class AnnoMatrix {
    ** Schema helper/accessors
    **/
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'field' implicitly has an 'any' type.
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   getMatrixColumns(field) {
     /*
     Return array of column names in the field.  ONLY supported on the
@@ -144,7 +158,7 @@ export default class AnnoMatrix {
     return _schemaColumns(this.schema, field);
   }
 
-  // eslint-disable-next-line class-methods-use-this -- need to be able to call this on instances
+  // eslint-disable-next-line class-methods-use-this, @typescript-eslint/explicit-module-boundary-types -- need to be able to call this on instances
   getMatrixFields() {
     /*
     Return array of fields in this annoMatrix.  Currently hard-wired to
@@ -156,6 +170,7 @@ export default class AnnoMatrix {
   }
 
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'field' implicitly has an 'any' type.
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   getColumnSchema(field, col) {
     /*
     Return the schema for the field & column ,eg,
@@ -169,6 +184,7 @@ export default class AnnoMatrix {
   }
 
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'field' implicitly has an 'any' type.
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   getColumnDimensions(field, col) {
     /*
     Return the dimensions on this field / column.  For most fields, which are 1D,
@@ -187,10 +203,12 @@ export default class AnnoMatrix {
   /**
    ** General utility methods
    **/
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   base() {
     /*
     return the base of view, or `this` if not a view.
     */
+    // eslint-disable-next-line @typescript-eslint/no-this-alias --- FIXME: disabled temporarily on migrate to TS.
     let annoMatrix = this;
     while (annoMatrix.isView) annoMatrix = annoMatrix.viewOf;
     return annoMatrix;
@@ -200,6 +218,7 @@ export default class AnnoMatrix {
    ** Load / read interfaces
    **/
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'field' implicitly has an 'any' type.
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   fetch(field, q) {
     /*
 		Return the given query on a single matrix field as a single dataframe.
@@ -258,6 +277,7 @@ export default class AnnoMatrix {
   }
 
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'field' implicitly has an 'any' type.
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   prefetch(field, q) {
     /*
 		Start a data fetch & cache fill.  Identical to fetch() except it does
@@ -289,7 +309,7 @@ export default class AnnoMatrix {
    **/
 
   // @ts-expect-error ts-migrate(6133) FIXME: 'col' is declared but its value is never read.
-  // eslint-disable-next-line class-methods-use-this, @typescript-eslint/no-unused-vars -- make sure subclass implements
+  // eslint-disable-next-line class-methods-use-this, @typescript-eslint/no-unused-vars, @typescript-eslint/explicit-module-boundary-types -- make sure subclass implements
   addObsAnnoCategory(col, category) {
     /*
     Add a new category value (aka "label") to a writable obs column, and return the new AnnoMatrix.
@@ -307,7 +327,7 @@ export default class AnnoMatrix {
   }
 
   // @ts-expect-error ts-migrate(6133) FIXME: 'col' is declared but its value is never read.
-  // eslint-disable-next-line class-methods-use-this, @typescript-eslint/no-unused-vars -- make sure subclass implements
+  // eslint-disable-next-line class-methods-use-this, @typescript-eslint/no-unused-vars, @typescript-eslint/explicit-module-boundary-types -- make sure subclass implements
   async removeObsAnnoCategory(col, category, unassignedCategory) {
     /*
     Remove a category value from an obs column, reassign any obs having that value
@@ -329,7 +349,7 @@ export default class AnnoMatrix {
   }
 
   // @ts-expect-error ts-migrate(6133) FIXME: 'col' is declared but its value is never read.
-  // eslint-disable-next-line class-methods-use-this, @typescript-eslint/no-unused-vars -- make sure subclass implements
+  // eslint-disable-next-line class-methods-use-this, @typescript-eslint/no-unused-vars, @typescript-eslint/explicit-module-boundary-types -- make sure subclass implements
   dropObsColumn(col) {
     /*
     Drop an entire writable column, eg a user-created obs annotation.  Typical use
@@ -346,7 +366,7 @@ export default class AnnoMatrix {
   }
 
   // @ts-expect-error ts-migrate(6133) FIXME: 'colSchema' is declared but its value is never rea... Remove this comment to see the full error message
-  // eslint-disable-next-line class-methods-use-this, @typescript-eslint/no-unused-vars -- make sure subclass implements
+  // eslint-disable-next-line class-methods-use-this, @typescript-eslint/no-unused-vars, @typescript-eslint/explicit-module-boundary-types -- make sure subclass implements
   addObsColumn(colSchema, Ctor, value) {
     /*
     Add a new writable OBS annotation column, with the caller-specified schema, initial value
@@ -376,7 +396,7 @@ export default class AnnoMatrix {
   }
 
   // @ts-expect-error ts-migrate(6133) FIXME: 'oldCol' is declared but its value is never read.
-  // eslint-disable-next-line class-methods-use-this, @typescript-eslint/no-unused-vars -- make sure subclass implements
+  // eslint-disable-next-line class-methods-use-this, @typescript-eslint/no-unused-vars, @typescript-eslint/explicit-module-boundary-types -- make sure subclass implements
   renameObsColumn(oldCol, newCol) {
     /*
     Rename the obs column 'oldCol' to have name 'newCol' and returns new AnnoMatrix.
@@ -392,7 +412,7 @@ export default class AnnoMatrix {
   }
 
   // @ts-expect-error ts-migrate(6133) FIXME: 'col' is declared but its value is never read.
-  // eslint-disable-next-line class-methods-use-this, @typescript-eslint/no-unused-vars -- make sure subclass implements
+  // eslint-disable-next-line class-methods-use-this, @typescript-eslint/no-unused-vars, @typescript-eslint/explicit-module-boundary-types -- make sure subclass implements
   async setObsColumnValues(col, obsLabels, value) {
     /*
     Set all obs with label in array 'obsLabels' to have 'value'.  Typical use would be
@@ -411,7 +431,7 @@ export default class AnnoMatrix {
   }
 
   // @ts-expect-error ts-migrate(6133) FIXME: 'col' is declared but its value is never read.
-  // eslint-disable-next-line class-methods-use-this, @typescript-eslint/no-unused-vars -- make sure subclass implements
+  // eslint-disable-next-line class-methods-use-this, @typescript-eslint/no-unused-vars, @typescript-eslint/explicit-module-boundary-types -- make sure subclass implements
   async resetObsColumnValues(col, oldValue, newValue) {
     /*
     Set by value - all elements in the column with value 'oldValue' are set to 'newValue'.
@@ -429,7 +449,7 @@ export default class AnnoMatrix {
   }
 
   // @ts-expect-error ts-migrate(6133) FIXME: 'colSchema' is declared but its value is never rea... Remove this comment to see the full error message
-  // eslint-disable-next-line class-methods-use-this, @typescript-eslint/no-unused-vars -- make sure subclass implements
+  // eslint-disable-next-line class-methods-use-this, @typescript-eslint/no-unused-vars, @typescript-eslint/explicit-module-boundary-types -- make sure subclass implements
   addEmbedding(colSchema) {
     /*
     Add a new obs embedding to the AnnoMatrix, with provided schema.
@@ -443,6 +463,7 @@ export default class AnnoMatrix {
   }
 
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'field' implicitly has an 'any' type.
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   getCacheKeys(field, query) {
     /*
 Return cache keys for columns associated with this query.  May return
@@ -455,6 +476,7 @@ Return cache keys for columns associated with this query.  May return
    ** Private interfaces below.
    **/
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'field' implicitly has an 'any' type.
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   _resolveCachedQueries(field, queries) {
     return (
       queries
@@ -471,6 +493,7 @@ Return cache keys for columns associated with this query.  May return
   }
 
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'field' implicitly has an 'any' type.
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   async _fetch(field, q) {
     if (!AnnoMatrix.fields().includes(field)) return undefined;
     const queries = Array.isArray(q) ? q : [q];
@@ -518,6 +541,7 @@ Return cache keys for columns associated with this query.  May return
   }
 
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'field' implicitly has an 'any' type.
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   async _getPendingLoad(field, query, fetchFn) {
     /*
     Given a query on a field, ensure that we only have a single outstanding
@@ -539,7 +563,7 @@ Return cache keys for columns associated with this query.  May return
     return this._pendingLoad[field][key];
   }
 
-  // eslint-disable-next-line class-methods-use-this -- make sure subclass implements
+  // eslint-disable-next-line class-methods-use-this, @typescript-eslint/explicit-module-boundary-types -- make sure subclass implements
   async _doLoad() {
     _subclassResponsibility();
   }
@@ -574,6 +598,7 @@ Return cache keys for columns associated with this query.  May return
   as much of the cache is pinned by that data structure.
   */
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'field' implicitly has an 'any' type.
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   _gcField(field, isHot, pinnedColumns) {
     const maxColumns = isHot ? 256 : 10;
     const cache = this._cache[field];
@@ -616,6 +641,7 @@ Return cache keys for columns associated with this query.  May return
   }
 
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'field' implicitly has an 'any' type.
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   _gcFetchCleanup(field, pinnedColumns) {
     /*
     Called during data load/fetch.  By definition, this is 'hot', so we
@@ -631,6 +657,7 @@ Return cache keys for columns associated with this query.  May return
   }
 
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'hints' implicitly has an 'any' type.
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   _gc(hints) {
     /*
     Called from middleware, or elsewhere.  isHot is true if we are in the active store, 
@@ -644,6 +671,7 @@ Return cache keys for columns associated with this query.  May return
   }
 
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'field' implicitly has an 'any' type.
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   _gcUpdateStats(field, dataframe) {
     /*
     called each time a query is performed, allowing the gc to update any bookkeeping
@@ -672,6 +700,7 @@ Return cache keys for columns associated with this query.  May return
   Do not override _clone();
   **/
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'clone' implicitly has an 'any' type.
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   _cloneDeeper(clone) {
     clone._cache = _shallowClone(this._cache);
     clone._gcInfo = new Map();
@@ -684,6 +713,7 @@ Return cache keys for columns associated with this query.  May return
     return clone;
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   _clone() {
     const clone = _shallowClone(this);
     this._cloneDeeper(clone);

client/src/annoMatrix/clone.ts

@@ -1,6 +1,7 @@
 /*
 Shallow clone an object, correctly handling prototype
 */
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export default function _shallowClone(orig: any) {
   return Object.assign(Object.create(Object.getPrototypeOf(orig)), orig);
 }

client/src/annoMatrix/crossfilter.ts

@@ -24,16 +24,22 @@ function _dimensionName(field, colNames) {
 
 export default class AnnoMatrixObsCrossfilter {
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'annoMatrix' implicitly has an 'any' typ... Remove this comment to see the full error message
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   constructor(annoMatrix, _obsCrossfilter = null) {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     (this as any).annoMatrix = annoMatrix;
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     (this as any).obsCrossfilter =
       _obsCrossfilter || new Crossfilter(annoMatrix._cache.obs);
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     (this as any).obsCrossfilter = (this as any).obsCrossfilter.setData(
       annoMatrix._cache.obs
     );
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   size() {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     return (this as any).obsCrossfilter.size();
   }
 
@@ -45,12 +51,15 @@ export default class AnnoMatrixObsCrossfilter {
   See API documentation in annoMatrix.js.
   **/
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'colSchema' implicitly has an 'any' type... Remove this comment to see the full error message
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   addObsColumn(colSchema, Ctor, value) {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     const annoMatrix = (this as any).annoMatrix.addObsColumn(
       colSchema,
       Ctor,
       value
     );
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     const obsCrossfilter = (this as any).obsCrossfilter.setData(
       annoMatrix._cache.obs
     );
@@ -58,7 +67,9 @@ export default class AnnoMatrixObsCrossfilter {
   }
 
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'col' implicitly has an 'any' type.
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   dropObsColumn(col) {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     const annoMatrix = (this as any).annoMatrix.dropObsColumn(col);
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'obsCrossfilter' does not exist on type '... Remove this comment to see the full error message
     let { obsCrossfilter } = this;
@@ -70,7 +81,9 @@ export default class AnnoMatrixObsCrossfilter {
   }
 
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'oldCol' implicitly has an 'any' type.
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   renameObsColumn(oldCol, newCol) {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     const annoMatrix = (this as any).annoMatrix.renameObsColumn(oldCol, newCol);
     const oldDimName = _dimensionName("obs", oldCol);
     const newDimName = _dimensionName("obs", newCol);
@@ -83,7 +96,9 @@ export default class AnnoMatrixObsCrossfilter {
   }
 
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'col' implicitly has an 'any' type.
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   addObsAnnoCategory(col, category) {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     const annoMatrix = (this as any).annoMatrix.addObsAnnoCategory(
       col,
       category
@@ -98,7 +113,9 @@ export default class AnnoMatrixObsCrossfilter {
   }
 
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'col' implicitly has an 'any' type.
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   async removeObsAnnoCategory(col, category, unassignedCategory) {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     const annoMatrix = await (this as any).annoMatrix.removeObsAnnoCategory(
       col,
       category,
@@ -114,7 +131,9 @@ export default class AnnoMatrixObsCrossfilter {
   }
 
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'col' implicitly has an 'any' type.
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   async setObsColumnValues(col, rowLabels, value) {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     const annoMatrix = await (this as any).annoMatrix.setObsColumnValues(
       col,
       rowLabels,
@@ -130,7 +149,9 @@ export default class AnnoMatrixObsCrossfilter {
   }
 
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'col' implicitly has an 'any' type.
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   async resetObsColumnValues(col, oldValue, newValue) {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     const annoMatrix = await (this as any).annoMatrix.resetObsColumnValues(
       col,
       oldValue,
@@ -146,10 +167,13 @@ export default class AnnoMatrixObsCrossfilter {
   }
 
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'colSchema' implicitly has an 'any' type... Remove this comment to see the full error message
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   addEmbedding(colSchema) {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     const annoMatrix = (this as any).annoMatrix.addEmbedding(colSchema);
     return new AnnoMatrixObsCrossfilter(
       annoMatrix,
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (this as any).obsCrossfilter
     );
   }
@@ -160,6 +184,7 @@ export default class AnnoMatrixObsCrossfilter {
    * annomatrix cache.
    */
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'field' implicitly has an 'any' type.
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   dropDimension(field, query) {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'annoMatrix' does not exist on type 'Anno... Remove this comment to see the full error message
     const { annoMatrix } = this;
@@ -182,6 +207,7 @@ export default class AnnoMatrixObsCrossfilter {
   **/
 
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'field' implicitly has an 'any' type.
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   async select(field, query, spec) {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'annoMatrix' does not exist on type 'Anno... Remove this comment to see the full error message
     const { annoMatrix } = this;
@@ -214,62 +240,83 @@ export default class AnnoMatrixObsCrossfilter {
     return new AnnoMatrixObsCrossfilter(annoMatrix, obsCrossfilter);
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   selectAll() {
     /*
 		Select all on any dimension in this field.
 		*/
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'annoMatrix' does not exist on type 'Anno... Remove this comment to see the full error message
     const { annoMatrix } = this;
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     const currentDims = (this as any).obsCrossfilter.dimensionNames();
     // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'xfltr' implicitly has an 'any' type.
     const obsCrossfilter = currentDims.reduce((xfltr, dim) => {
       return xfltr.select(dim, { mode: "all" });
-    }, (this as any).obsCrossfilter);
+    }, (this as any).obsCrossfilter); // eslint-disable-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     return new AnnoMatrixObsCrossfilter(annoMatrix, obsCrossfilter);
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   countSelected() {
     /* if no data yet indexed in the crossfilter, just say everything is selected */
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     if ((this as any).obsCrossfilter.size() === 0)
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       return (this as any).annoMatrix.nObs;
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     return (this as any).obsCrossfilter.countSelected();
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   allSelectedMask() {
     /* if no data yet indexed in the crossfilter, just say everything is selected */
     if (
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (this as any).obsCrossfilter.size() === 0 ||
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (this as any).obsCrossfilter.dimensionNames().length === 0
     ) {
       /* fake the mask */
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       return new Uint8Array((this as any).annoMatrix.nObs).fill(1);
     }
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     return (this as any).obsCrossfilter.allSelectedMask();
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   allSelectedLabels() {
     /* if no data yet indexed in the crossfilter, just say everything is selected */
     if (
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (this as any).obsCrossfilter.size() === 0 ||
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (this as any).obsCrossfilter.dimensionNames().length === 0
     ) {
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       return (this as any).annoMatrix.rowIndex.labels();
     }
 
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     const mask = (this as any).obsCrossfilter.allSelectedMask();
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     const index = (this as any).annoMatrix.rowIndex.isubsetMask(mask);
     return index.labels();
   }
 
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'array' implicitly has an 'any' type.
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   fillByIsSelected(array, selectedValue, deselectedValue) {
     /* if no data yet indexed in the crossfilter, just say everything is selected */
     if (
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (this as any).obsCrossfilter.size() === 0 ||
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (this as any).obsCrossfilter.dimensionNames().length === 0
     ) {
       return array.fill(selectedValue);
     }
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     return (this as any).obsCrossfilter.fillByIsSelected(
       array,
       selectedValue,
@@ -282,6 +329,7 @@ export default class AnnoMatrixObsCrossfilter {
    **/
 
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'annoMatrix' implicitly has an 'any' typ... Remove this comment to see the full error message
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   _addObsCrossfilterDimension(annoMatrix, obsCrossfilter, field, df) {
     if (field === "var") return obsCrossfilter;
     const dimName = _dimensionNameFromDf(field, df);
@@ -293,9 +341,11 @@ export default class AnnoMatrixObsCrossfilter {
   }
 
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'field' implicitly has an 'any' type.
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   _getColumnBaseType(field, col) {
     /* Look up the primitive type for this field/col */
     const colSchema = _getColumnSchema(
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (this as any).annoMatrix.schema,
       field,
       col
@@ -304,6 +354,7 @@ export default class AnnoMatrixObsCrossfilter {
   }
 
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'field' implicitly has an 'any' type.
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   _getObsDimensionParams(field, df) {
     /* return the crossfilter dimensiontype type and params for this field/dataframe */
 

client/src/annoMatrix/fetchHelpers.ts

@@ -1,18 +1,22 @@
 export { doBinaryRequest, doFetch } from "../util/actionHelpers";
 
 /* double URI encode - needed for query-param filters */
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export function _dubEncURIComp(s: any) {
   return encodeURIComponent(encodeURIComponent(s));
 }
 
 /* currently unused, consider deleting */
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export function _fetchResult(promise: any) {
   let _status = "pending";
   const res = promise.then(
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     (r: any) => {
       _status = "success";
       return r;
     },
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     (e: any) => {
       _status = "error";
       throw e;

client/src/annoMatrix/loader.ts

@@ -23,6 +23,7 @@ import {
 const promiseThrottle = new PromiseLimit(5);
 
 export default class AnnoMatrixLoader extends AnnoMatrix {
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   baseURL: any;
 
   /*
@@ -35,6 +36,7 @@ export default class AnnoMatrixLoader extends AnnoMatrix {
     new AnnoMatrixLoader(serverBaseURL, schema) -> instance
 
   */
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   constructor(baseURL: any, schema: any) {
     const { nObs, nVar } = schema.dataframe;
     super(schema, nObs, nVar);
@@ -50,6 +52,7 @@ export default class AnnoMatrixLoader extends AnnoMatrix {
   /**
    ** Public.  API described in base class.
    **/
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   addObsAnnoCategory(col: any, category: any) {
     /*
     Add a new category (aka label) to the schema for an obs column.
@@ -62,9 +65,13 @@ export default class AnnoMatrixLoader extends AnnoMatrix {
     return newAnnoMatrix;
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   async removeObsAnnoCategory(
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     col: any,
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     category: any,
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     unassignedCategory: any
   ) {
     /*
@@ -86,6 +93,7 @@ export default class AnnoMatrixLoader extends AnnoMatrix {
     return newAnnoMatrix;
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   dropObsColumn(col: any) {
     /*
 		drop column from field
@@ -94,12 +102,14 @@ export default class AnnoMatrixLoader extends AnnoMatrix {
     _writableCheck(colSchema); // throws on error
 
     const newAnnoMatrix = this._clone();
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     newAnnoMatrix._cache.obs = (this as any)._cache.obs.dropCol(col);
     newAnnoMatrix.schema = removeObsAnnoColumn(this.schema, col);
     return newAnnoMatrix;
   }
 
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'colSchema' implicitly has an 'any' type... Remove this comment to see the full error message
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   addObsColumn(colSchema, Ctor, value) {
     /*
 		add a column to field, initializing with value.  Value may 
@@ -112,6 +122,7 @@ export default class AnnoMatrixLoader extends AnnoMatrix {
     const colName = colSchema.name;
     if (
       _getColumnSchema(this.schema, "obs", colName) ||
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (this as any)._cache.obs.hasCol(colName)
     ) {
       throw new Error("column already exists");
@@ -128,6 +139,7 @@ export default class AnnoMatrixLoader extends AnnoMatrix {
     } else {
       data = new Ctor(this.nObs).fill(value);
     }
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     newAnnoMatrix._cache.obs = (this as any)._cache.obs.withCol(colName, data);
     _normalizeCategoricalSchema(
       colSchema,
@@ -138,14 +150,17 @@ export default class AnnoMatrixLoader extends AnnoMatrix {
   }
 
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'oldCol' implicitly has an 'any' type.
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   renameObsColumn(oldCol, newCol) {
     /*
     Rename the obs oldColName to newColName.  oldCol must be writable.
     */
     const oldColSchema = _getColumnSchema(this.schema, "obs", oldCol);
     _writableCheck(oldColSchema);
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     const value = (this as any)._cache.obs.hasCol(oldCol)
-      ? (this as any)._cache.obs.col(oldCol).asArray()
+      ? // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
+        (this as any)._cache.obs.col(oldCol).asArray()
       : undefined;
     return this.dropObsColumn(oldCol).addObsColumn(
       {
@@ -158,6 +173,7 @@ export default class AnnoMatrixLoader extends AnnoMatrix {
   }
 
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'col' implicitly has an 'any' type.
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   async setObsColumnValues(col, rowLabels, value) {
     /*
 		Set all rows identified by rowLabels to value.
@@ -167,10 +183,12 @@ export default class AnnoMatrixLoader extends AnnoMatrix {
 
     // ensure that we have the data in cache before we manipulate it
     await this.fetch("obs", col);
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     if (!(this as any)._cache.obs.hasCol(col))
       throw new Error("Internal error - user annotation data missing");
 
     const rowIndices = this.rowIndex.getOffsets(rowLabels);
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     const data = (this as any)._cache.obs.col(col).asArray().slice();
     for (let i = 0, len = rowIndices.length; i < len; i += 1) {
       const idx = rowIndices[i];
@@ -179,6 +197,7 @@ export default class AnnoMatrixLoader extends AnnoMatrix {
     }
 
     const newAnnoMatrix = this._clone();
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     newAnnoMatrix._cache.obs = (this as any)._cache.obs.replaceColData(
       col,
       data
@@ -191,6 +210,7 @@ export default class AnnoMatrixLoader extends AnnoMatrix {
   }
 
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'col' implicitly has an 'any' type.
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   async resetObsColumnValues(col, oldValue, newValue) {
     /*
     Set all rows with value 'oldValue' to 'newValue'.
@@ -204,15 +224,18 @@ export default class AnnoMatrixLoader extends AnnoMatrix {
 
     // ensure that we have the data in cache before we manipulate it
     await this.fetch("obs", col);
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     if (!(this as any)._cache.obs.hasCol(col))
       throw new Error("Internal error - user annotation data missing");
 
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     const data = (this as any)._cache.obs.col(col).asArray().slice();
     for (let i = 0, l = data.length; i < l; i += 1) {
       if (data[i] === oldValue) data[i] = newValue;
     }
 
     const newAnnoMatrix = this._clone();
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     newAnnoMatrix._cache.obs = (this as any)._cache.obs.replaceColData(
       col,
       data
@@ -225,6 +248,7 @@ export default class AnnoMatrixLoader extends AnnoMatrix {
   }
 
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'colSchema' implicitly has an 'any' type... Remove this comment to see the full error message
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   addEmbedding(colSchema) {
     /*
     add new layout to the obs embeddings
@@ -243,6 +267,7 @@ export default class AnnoMatrixLoader extends AnnoMatrix {
    ** Private below
    **/
   // @ts-expect-error ts-migrate(2416) FIXME: Property '_doLoad' in type 'AnnoMatrixLoader' is n... Remove this comment to see the full error message
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   async _doLoad(field, query) {
     /*
     _doLoad - evaluates the query against the field. Returns:

client/src/annoMatrix/middleware.ts

@@ -11,6 +11,7 @@ Undoable metareducer and the AnnoMatrix private API.  It would be helpful
 to make the Undoable interface better factored.
 */
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 const annoMatrixGC = (store: any) => (next: any) => (action: any) => {
   if (_itIsTimeForGC()) {
     _doGC(store);
@@ -34,6 +35,7 @@ function _itIsTimeForGC() {
   return false;
 }
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function _doGC(store: any) {
   const state = store.getState();
 
@@ -43,7 +45,9 @@ function _doGC(store: any) {
   const undoableFuture = state["@@undoable/future"];
   const undoableStack = undoablePast
     .concat(undoableFuture)
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     .flatMap((snapshot: any) =>
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       snapshot.filter((v: any) => v[0] === "annoMatrix").map((v: any) => v[1])
     );
   const currentAnnoMatrix = state.annoMatrix;
@@ -53,6 +57,7 @@ function _doGC(store: any) {
   as our current gc algo is more aggressive with those not hot.
   */
   const allAnnoMatrices = new Map(
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     undoableStack.map((m: any) => [m, { isHot: false }])
   );
   let am = currentAnnoMatrix;
@@ -61,6 +66,7 @@ function _doGC(store: any) {
     am = am.viewOf;
   }
   allAnnoMatrices.forEach((hints, annoMatrix) =>
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     (annoMatrix as any)._gc(hints)
   );
 }

client/src/annoMatrix/query.ts

@@ -10,6 +10,7 @@ import { _dubEncURIComp } from "./fetchHelpers";
  * @param {object | string} query - the query
  * @returns {object | string} - the normalized query
  */
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export function _queryValidate(query: any) {
   if (typeof query !== "object") return query;
 
@@ -40,10 +41,12 @@ export function _queryValidate(query: any) {
   throw new Error("query must specify one of where or summarize");
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export function _expectSimpleQuery(query: any) {
   if (typeof query === "object") throw new Error("expected simple query");
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export function _expectComplexQuery(query: any) {
   if (typeof query !== "object") throw new Error("expected complex query");
 }
@@ -55,6 +58,7 @@ export function _expectComplexQuery(query: any) {
  * @param {string|object} query
  * @returns the key
  */
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export function _queryCacheKey(field: any, query: any) {
   if (typeof query === "object") {
     // complex query
@@ -84,6 +88,7 @@ export function _queryCacheKey(field: any, query: any) {
   return `${field}/${query}`;
 }
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function _urlEncodeWhereQuery(q: any) {
   const { field: queryField, column: queryColumn, value: queryValue } = q;
   return `${_dubEncURIComp(queryField)}:${_dubEncURIComp(
@@ -91,14 +96,16 @@ function _urlEncodeWhereQuery(q: any) {
   )}=${_dubEncURIComp(queryValue)}`;
 }
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function _urlEncodeSummarizeQuery(q: any) {
   const { method, field, column, values } = q;
-  const filter = values
+  const filter = values // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     .map((value: any) => _urlEncodeWhereQuery({ field, column, value }))
     .join("&");
   return `method=${method}&${filter}`;
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export function _urlEncodeComplexQuery(q: any) {
   if (typeof q === "object") {
     if (q.where) {
@@ -111,6 +118,7 @@ export function _urlEncodeComplexQuery(q: any) {
   throw new Error("Unrecognized complex query type");
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export function _urlEncodeLabelQuery(colKey: any, q: any) {
   if (!colKey) throw new Error("Unsupported query by name");
   if (typeof q !== "string") throw new Error("Query must be a simple label.");
@@ -120,6 +128,7 @@ export function _urlEncodeLabelQuery(colKey: any, q: any) {
 /**
  * Generate the column key the server will send us for this query.
  */
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export function _hashStringValues(arrayOfString: any) {
   const hash = sha1(arrayOfString.join(""));
   return hash;

client/src/annoMatrix/schema.ts

@@ -4,6 +4,7 @@ Private helper functions related to schema
 import catLabelSort from "../util/catLabelSort";
 import { unassignedCategoryLabel } from "../globals";
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export function _getColumnSchema(schema: any, field: any, col: any) {
   /* look up the column definition */
   switch (field) {
@@ -26,6 +27,7 @@ export function _getColumnSchema(schema: any, field: any, col: any) {
   }
 }
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export function _getColumnDimensionNames(schema: any, field: any, col: any) {
   /*
 		field/col may be an alias for multiple columns. Currently used to map ND 
@@ -40,6 +42,7 @@ export function _getColumnDimensionNames(schema: any, field: any, col: any) {
 }
 
 // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'schema' implicitly has an 'any' type.
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
 export function _schemaColumns(schema, field) {
   switch (field) {
     case "obs":
@@ -54,6 +57,7 @@ export function _schemaColumns(schema, field) {
 }
 
 // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'schema' implicitly has an 'any' type.
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
 export function _getWritableColumns(schema, field) {
   if (field !== "obs") return [];
   return (
@@ -66,12 +70,14 @@ export function _getWritableColumns(schema, field) {
 }
 
 // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'schema' implicitly has an 'any' type.
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
 export function _isContinuousType(schema) {
   const { type } = schema;
   return !(type === "string" || type === "boolean" || type === "categorical");
 }
 
 // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'colSchema' implicitly has an 'any' type... Remove this comment to see the full error message
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
 export function _normalizeCategoricalSchema(colSchema, col) {
   /*
   Ensure all enum schema types have a categories array, that

client/src/annoMatrix/viewCreators.ts

@@ -5,6 +5,7 @@ instances of AnnoMatrix, implementing common UI functions.
 
 import { AnnoMatrixRowSubsetView, AnnoMatrixClipView } from "./views";
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export function isubsetMask(annoMatrix: any, obsMask: any) {
   /*
 		Subset annomatrix to contain the rows which have truish value in the mask.
@@ -14,6 +15,7 @@ export function isubsetMask(annoMatrix: any, obsMask: any) {
 }
 
 // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'annoMatrix' implicitly has an 'any' typ... Remove this comment to see the full error message
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
 export function isubset(annoMatrix, obsOffsets) {
   /*
 		Subset annomatrix to contain the positions contained in the obsOffsets array
@@ -27,6 +29,7 @@ export function isubset(annoMatrix, obsOffsets) {
 }
 
 // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'annoMatrix' implicitly has an 'any' typ... Remove this comment to see the full error message
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
 export function subset(annoMatrix, obsLabels) {
   /*
 		subset based on labels
@@ -36,6 +39,7 @@ export function subset(annoMatrix, obsLabels) {
 }
 
 // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'annoMatrix' implicitly has an 'any' typ... Remove this comment to see the full error message
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
 export function subsetByIndex(annoMatrix, obsIndex) {
   /*
   subset based upon the new obs index.
@@ -44,6 +48,7 @@ export function subsetByIndex(annoMatrix, obsIndex) {
 }
 
 // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'annoMatrix' implicitly has an 'any' typ... Remove this comment to see the full error message
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
 export function clip(annoMatrix, qmin, qmax) {
   /*
 		Create a view that clips all continuous data to the [min, max] range.

client/src/annoMatrix/views.ts

@@ -9,6 +9,7 @@ import { _whereCacheCreate } from "./whereCache";
 import { _isContinuousType, _getColumnSchema } from "./schema";
 
 class AnnoMatrixView extends AnnoMatrix {
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   constructor(viewOf: any, rowIndex = null) {
     // @ts-expect-error ts-migrate(2531) FIXME: Object is possibly 'null'.
     const nObs = rowIndex ? rowIndex.size() : viewOf.nObs;
@@ -17,6 +18,7 @@ class AnnoMatrixView extends AnnoMatrix {
     this.isView = true;
   }
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   addObsAnnoCategory(col: any, category: any) {
     const newAnnoMatrix = this._clone();
     newAnnoMatrix.viewOf = this.viewOf.addObsAnnoCategory(col, category);
@@ -25,8 +27,11 @@ class AnnoMatrixView extends AnnoMatrix {
   }
 
   async removeObsAnnoCategory(
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     col: any,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     category: any,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     unassignedCategory: any
   ) {
     const newAnnoMatrix = this._clone();
@@ -39,6 +44,7 @@ class AnnoMatrixView extends AnnoMatrix {
     return newAnnoMatrix;
   }
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   dropObsColumn(col: any) {
     const newAnnoMatrix = this._clone();
     newAnnoMatrix.viewOf = this.viewOf.dropObsColumn(col);
@@ -47,6 +53,7 @@ class AnnoMatrixView extends AnnoMatrix {
     return newAnnoMatrix;
   }
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   addObsColumn(colSchema: any, Ctor: any, value: any) {
     const newAnnoMatrix = this._clone();
     newAnnoMatrix.viewOf = this.viewOf.addObsColumn(colSchema, Ctor, value);
@@ -54,6 +61,7 @@ class AnnoMatrixView extends AnnoMatrix {
     return newAnnoMatrix;
   }
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   renameObsColumn(oldCol: any, newCol: any) {
     const newAnnoMatrix = this._clone();
     newAnnoMatrix.viewOf = this.viewOf.renameObsColumn(oldCol, newCol);
@@ -61,6 +69,7 @@ class AnnoMatrixView extends AnnoMatrix {
     return newAnnoMatrix;
   }
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   async setObsColumnValues(col: any, rowLabels: any, value: any) {
     const newAnnoMatrix = this._clone();
     newAnnoMatrix.viewOf = await this.viewOf.setObsColumnValues(
@@ -73,6 +82,7 @@ class AnnoMatrixView extends AnnoMatrix {
     return newAnnoMatrix;
   }
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   async resetObsColumnValues(col: any, oldValue: any, newValue: any) {
     const newAnnoMatrix = this._clone();
     newAnnoMatrix.viewOf = await this.viewOf.resetObsColumnValues(
@@ -85,6 +95,7 @@ class AnnoMatrixView extends AnnoMatrix {
     return newAnnoMatrix;
   }
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   addEmbedding(colSchema: any) {
     const newAnnoMatrix = this._clone();
     newAnnoMatrix.viewOf = this.viewOf.addEmbedding(colSchema);
@@ -100,6 +111,7 @@ class AnnoMatrixMapView extends AnnoMatrixView {
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'viewOf' implicitly has an 'any' type.
   constructor(viewOf, mapFn) {
     super(viewOf);
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     (this as any).mapFn = mapFn;
   }
 
@@ -110,6 +122,7 @@ class AnnoMatrixMapView extends AnnoMatrixView {
     const dfMapped = df.mapColumns((colData, colIdx) => {
       const colLabel = df.colIndex.getLabel(colIdx);
       const colSchema = _getColumnSchema(this.schema, field, colLabel);
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       return (this as any).mapFn(field, colLabel, colSchema, colData, df);
     });
     const whereCacheUpdate = _whereCacheCreate(
@@ -126,12 +139,15 @@ export class AnnoMatrixClipView extends AnnoMatrixMapView {
 	A view which is a clipped transformation of its parent
 	*/
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'viewOf' implicitly has an 'any' type.
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   constructor(viewOf, qmin, qmax) {
     // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'field' implicitly has an 'any' type.
     super(viewOf, (field, colLabel, colSchema, colData, df) =>
       _clipAnnoMatrix(field, colLabel, colSchema, colData, df, qmin, qmax)
     );
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     (this as any).isClipped = true;
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     (this as any).clipRange = [qmin, qmax];
     Object.seal(this);
   }
@@ -142,12 +158,14 @@ export class AnnoMatrixRowSubsetView extends AnnoMatrixView {
 	A view which is a subset of total rows.
 	*/
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'viewOf' implicitly has an 'any' type.
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   constructor(viewOf, rowIndex) {
     super(viewOf, rowIndex);
     Object.seal(this);
   }
 
   // @ts-expect-error ts-migrate(2416) FIXME: Property '_doLoad' in type 'AnnoMatrixRowSubsetVie... Remove this comment to see the full error message
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   async _doLoad(field, query) {
     const df = await this.viewOf._fetch(field, query);
 

client/src/annoMatrix/whereCache.ts

@@ -51,10 +51,15 @@ creates a cache entry of:
 import { _getColumnDimensionNames } from "./schema";
 import { _hashStringValues } from "./query";
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
 export function _whereCacheGet(
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   whereCache: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   schema: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   field: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   query: any
 ) {
   /* 
@@ -91,6 +96,7 @@ export function _whereCacheGet(
 }
 
 // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'field' implicitly has an 'any' type.
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
 export function _whereCacheCreate(field, query, columnLabels) {
   /*
 	Create a new whereCache
@@ -141,6 +147,7 @@ export function _whereCacheCreate(field, query, columnLabels) {
 function __mergeQueries(dst, src) {
   for (const [queryField, columnMap] of Object.entries(src)) {
     dst[queryField] = dst[queryField] || new Map();
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     for (const [queryColumn, valueMap] of columnMap as any) {
       if (!dst[queryField].has(queryColumn))
         dst[queryField].set(queryColumn, new Map());
@@ -181,6 +188,7 @@ function __whereCacheMerge(dst, src) {
 }
 
 // @ts-expect-error ts-migrate(7019) FIXME: Rest parameter 'caches' implicitly has an 'any[]' ... Remove this comment to see the full error message
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
 export function _whereCacheMerge(...caches) {
   return caches.reduce(__whereCacheMerge, {});
 }

client/src/components/annoDialog.tsx

@@ -1,14 +1,18 @@
 import React from "react";
 import { Button, Tooltip, Dialog, Classes, Colors } from "@blueprintjs/core";
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 type State = any;
 
+// eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
 class AnnoDialog extends React.PureComponent<{}, State> {
+  // eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
   constructor(props: {}) {
     super(props);
     this.state = {};
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     const {
       // @ts-expect-error ts-migrate(2339) FIXME: Property 'isActive' does not exist on type 'Readon... Remove this comment to see the full error message

client/src/components/app.tsx

@@ -17,11 +17,15 @@ import actions from "../actions";
 
 // @ts-expect-error ts-migrate(1238) FIXME: Unable to resolve signature of class decorator whe... Remove this comment to see the full error message
 @connect((state) => ({
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   loading: (state as any).controls.loading,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   error: (state as any).controls.error,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   graphRenderCounter: (state as any).controls.graphRenderCounter,
 }))
 class App extends React.Component {
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   componentDidMount() {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch } = this.props;
@@ -33,12 +37,14 @@ class App extends React.Component {
     this.forceUpdate();
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   _onURLChanged() {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch } = this.props;
     dispatch({ type: "url changed", url: document.location.href });
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'loading' does not exist on type 'Readonl... Remove this comment to see the full error message
     const { loading, error, graphRenderCounter } = this.props;
@@ -72,6 +78,7 @@ class App extends React.Component {
         {loading || error ? null : (
           <Layout>
             <LeftSideBar />
+            {/* eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS. */}
             {(viewportRef: any) => (
               <>
                 <MenuBar />

client/src/components/autosave/filenameDialog.tsx

@@ -11,22 +11,31 @@ import {
   Tooltip,
 } from "@blueprintjs/core";
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 type State = any;
 
 // @ts-expect-error ts-migrate(1238) FIXME: Unable to resolve signature of class decorator whe... Remove this comment to see the full error message
 @connect((state) => ({
   idhash:
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     (state as any).config?.parameters?.["annotations-user-data-idhash"] ?? null,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   annotations: (state as any).annotations,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   auth: (state as any).config?.authentication,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   userInfo: (state as any).userInfo,
   writableCategoriesEnabled:
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     (state as any).config?.parameters?.annotations ?? false,
   writableGenesetsEnabled: !(
-    (state as any).config?.parameters?.annotations_genesets_readonly ?? true
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
+    ((state as any).config?.parameters?.annotations_genesets_readonly ?? true)
   ),
 }))
+// eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
 class FilenameDialog extends React.Component<{}, State> {
+  // eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
   constructor(props: {}) {
     super(props);
     this.state = {
@@ -34,8 +43,10 @@ class FilenameDialog extends React.Component<{}, State> {
     };
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   dismissFilenameDialog = () => {};
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleCreateFilename = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch } = this.props;
@@ -46,6 +57,7 @@ class FilenameDialog extends React.Component<{}, State> {
     });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   filenameError = () => {
     const legalNames = /^\w+$/;
     const { filenameText } = this.state;
@@ -66,6 +78,7 @@ class FilenameDialog extends React.Component<{}, State> {
     return err;
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   filenameErrorMessage = () => {
     const err = this.filenameError();
     let markup = null;
@@ -101,6 +114,7 @@ class FilenameDialog extends React.Component<{}, State> {
     return markup;
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     const {
       // @ts-expect-error ts-migrate(2339) FIXME: Property 'writableCategoriesEnabled' does not exis... Remove this comment to see the full error message

client/src/components/autosave/index.tsx

@@ -3,29 +3,40 @@ import { connect } from "react-redux";
 import actions from "../../actions";
 import FilenameDialog from "./filenameDialog";
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 type State = any;
 
 // @ts-expect-error ts-migrate(1238) FIXME: Unable to resolve signature of class decorator whe... Remove this comment to see the full error message
 @connect((state) => ({
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   annotations: (state as any).annotations,
   obsAnnotationSaveInProgress:
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     (state as any).autosave?.obsAnnotationSaveInProgress ?? false,
   genesetSaveInProgress:
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     (state as any).autosave?.genesetSaveInProgress ?? false,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   error: (state as any).autosave?.error,
   writableCategoriesEnabled:
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     (state as any).config?.parameters?.annotations ?? false,
   writableGenesetsEnabled: !(
-    (state as any).config?.parameters?.annotations_genesets_readonly ?? true
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
+    ((state as any).config?.parameters?.annotations_genesets_readonly ?? true)
   ),
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   annoMatrix: (state as any).annoMatrix,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   genesets: (state as any).genesets,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   lastSavedAnnoMatrix: (state as any).autosave?.lastSavedAnnoMatrix,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   lastSavedGenesets: (state as any).autosave?.lastSavedGenesets,
 }))
+// eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
 class Autosave extends React.Component<{}, State> {
-  clearInterval: any;
+  // eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
-
   constructor(props: {}) {
     super(props);
     this.state = {
@@ -33,6 +44,7 @@ class Autosave extends React.Component<{}, State> {
     };
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   componentDidMount() {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'writableCategoriesEnabled' does not exis... Remove this comment to see the full error message
     const { writableCategoriesEnabled, writableGenesetsEnabled } = this.props;
@@ -46,11 +58,13 @@ class Autosave extends React.Component<{}, State> {
     this.setState({ timer });
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   componentWillUnmount() {
     const { timer } = this.state;
-    if (timer) this.clearInterval(timer);
+    if (timer) clearInterval(timer);
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   tick = () => {
     const {
       // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
@@ -68,6 +82,7 @@ class Autosave extends React.Component<{}, State> {
     }
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   needToSaveObsAnnotations = () => {
     /* return true if we need to save obs cell labels, false if we don't */
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'annoMatrix' does not exist on type 'Read... Remove this comment to see the full error message
@@ -75,6 +90,7 @@ class Autosave extends React.Component<{}, State> {
     return actions.needToSaveObsAnnotations(annoMatrix, lastSavedAnnoMatrix);
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   needToSaveGenesets = () => {
     /* return true if we need to save gene ses, false if we do not */
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'genesets' does not exist on type 'Readon... Remove this comment to see the full error message
@@ -82,16 +98,19 @@ class Autosave extends React.Component<{}, State> {
     return genesets.initialized && genesets.genesets !== lastSavedGenesets;
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   needToSave() {
     return this.needToSaveGenesets() || this.needToSaveObsAnnotations();
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   saveInProgress() {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'obsAnnotationSaveInProgress' does not ex... Remove this comment to see the full error message
     const { obsAnnotationSaveInProgress, genesetSaveInProgress } = this.props;
     return obsAnnotationSaveInProgress || genesetSaveInProgress;
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   statusMessage() {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'error' does not exist on type 'Readonly<... Remove this comment to see the full error message
     const { error } = this.props;
@@ -101,6 +120,7 @@ class Autosave extends React.Component<{}, State> {
     return this.needToSave() ? "Unsaved" : "All saved";
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     const {
       // @ts-expect-error ts-migrate(2339) FIXME: Property 'writableCategoriesEnabled' does not exis... Remove this comment to see the full error message

client/src/components/brushableHistogram/error.tsx

@@ -1,6 +1,7 @@
 import React from "react";
 import * as globals from "../../globals";
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 const ErrorLoading = ({ displayName, zebra }: any) => {
   return (
     <div

client/src/components/brushableHistogram/histogram.tsx

@@ -5,6 +5,7 @@ import * as d3 from "d3";
 import maybeScientific from "../../util/maybeScientific";
 import clamp from "../../util/clamp";
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
 const Histogram = ({
   field,
   fieldForId,
@@ -17,7 +18,7 @@ const Histogram = ({
   margin,
   isColorBy,
   selectionRange,
-  mini,
+  mini, // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 }: any) => {
   const svgRef = useRef(null);
   const [brush, setBrush] = useState(null);
@@ -80,6 +81,7 @@ const Histogram = ({
           // @ts-expect-error ts-migrate(2769) FIXME: No overload matches this call.
           isColorBy
             ? // @ts-expect-error ts-migrate(6133) FIXME: 'd' is declared but its value is never read.
+              // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
               (d: any, i: any) => colorScale(histogramScale(binStart(i)))
             : defaultBarColor
         );
@@ -134,6 +136,7 @@ const Histogram = ({
             .tickFormat(
               // @ts-expect-error ts-migrate(2769) FIXME: No overload matches this call.
               d3.format(
+                // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
                 y.domain().some((n: any) => Math.abs(n) >= 10000) ? ".0e" : ","
               )
             )

client/src/components/brushableHistogram/index.tsx

@@ -38,21 +38,28 @@ const HEIGHT_MINI = 15 - MARGIN_MINI.TOP - MARGIN_MINI.BOTTOM;
     field
   );
   return {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     annoMatrix: (state as any).annoMatrix,
     isScatterplotXXaccessor:
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (state as any).controls.scatterplotXXaccessor === field,
     isScatterplotYYaccessor:
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (state as any).controls.scatterplotYYaccessor === field,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     continuousSelectionRange: (state as any).continuousSelection[myName],
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     isColorAccessor: (state as any).colors.colorAccessor === field,
   };
 })
 class HistogramBrush extends React.PureComponent {
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   static watchAsync(props: any, prevProps: any) {
     return !shallowEqual(props.watchProps, prevProps.watchProps);
   }
 
   /* memoized closure to prevent HistogramHeader unecessary repaint */
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   handleColorAction = memoize((dispatch) => (field: any, isObs: any) => {
     if (isObs) {
       dispatch({
@@ -65,6 +72,7 @@ class HistogramBrush extends React.PureComponent {
   });
 
   // @ts-expect-error ts-migrate(6133) FIXME: 'selection' is declared but its value is never rea... Remove this comment to see the full error message
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   onBrush = (selection: any, x: any, eventType: any) => {
     const type = `continuous metadata histogram ${eventType}`;
     return () => {
@@ -82,13 +90,17 @@ class HistogramBrush extends React.PureComponent {
       } = this.props;
 
       // ignore programmatically generated events
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       if (!(d3 as any).event.sourceEvent) return;
       // ignore cascading events, which are programmatically generated
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       if ((d3 as any).event.sourceEvent.sourceEvent) return;
 
       const query = this.createQuery();
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       const range = (d3 as any).event.selection
-        ? [x((d3 as any).event.selection[0]), x((d3 as any).event.selection[1])]
+        ? // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
+          [x((d3 as any).event.selection[0]), x((d3 as any).event.selection[1])]
         : null;
       const otherProps = {
         selection: field,
@@ -105,7 +117,9 @@ class HistogramBrush extends React.PureComponent {
   };
 
   // @ts-expect-error ts-migrate(6133) FIXME: 'selection' is declared but its value is never rea... Remove this comment to see the full error message
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   onBrushEnd = (selection: any, x: any) => {
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
     return () => {
       const {
         // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
@@ -123,30 +137,38 @@ class HistogramBrush extends React.PureComponent {
       const smallAmountToAvoidInfiniteLoop = 0.1;
 
       // ignore programmatically generated events
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       if (!(d3 as any).event.sourceEvent) return;
       // ignore cascading events, which are programmatically generated
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       if ((d3 as any).event.sourceEvent.sourceEvent) return;
 
       let type;
       let range = null;
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       if ((d3 as any).event.selection) {
         type = "continuous metadata histogram end";
         if (
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           (d3 as any).event.selection[1] - (d3 as any).event.selection[0] >
           minAllowedBrushSize
         ) {
           range = [
+            // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
             x((d3 as any).event.selection[0]),
+            // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
             x((d3 as any).event.selection[1]),
           ];
         } else {
           /* the user selected range is too small and will be hidden #587, so take control of it procedurally */
           /* https://stackoverflow.com/questions/12354729/d3-js-limit-size-of-brush */
           const procedurallyResizedBrushWidth =
+            // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
             (d3 as any).event.selection[0] +
             minAllowedBrushSize +
             smallAmountToAvoidInfiniteLoop; //
           range = [
+            // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
             x((d3 as any).event.selection[0]),
             x(procedurallyResizedBrushWidth),
           ];
@@ -170,6 +192,7 @@ class HistogramBrush extends React.PureComponent {
     };
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleSetGeneAsScatterplotX = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, field } = this.props;
@@ -179,6 +202,7 @@ class HistogramBrush extends React.PureComponent {
     });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleSetGeneAsScatterplotY = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, field } = this.props;
@@ -188,6 +212,7 @@ class HistogramBrush extends React.PureComponent {
     });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   removeHistogram = () => {
     const {
       // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
@@ -224,6 +249,7 @@ class HistogramBrush extends React.PureComponent {
     }
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   fetchAsyncProps = async () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'annoMatrix' does not exist on type 'Read... Remove this comment to see the full error message
     const { annoMatrix, width } = this.props;
@@ -289,7 +315,7 @@ class HistogramBrush extends React.PureComponent {
     };
   };
 
-  // eslint-disable-next-line class-methods-use-this -- instance method allows for memoization per annotation
+  // eslint-disable-next-line class-methods-use-this, @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- instance method allows for memoization per annotation
   calcHistogramCache(col: any, newMargin: any, newWidth: any, newHeight: any) {
     /*
      recalculate expensive stuff, notably bins, summaries, etc.
@@ -299,28 +325,38 @@ class HistogramBrush extends React.PureComponent {
     const { min: domainMin, max: domainMax } = summary;
     const numBins = 40;
     const { TOP: topMargin, LEFT: leftMargin } = newMargin;
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     (histogramCache as any).domain = [domainMin, domainMax];
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     /* doesn't change with mini */ (histogramCache as any).x = d3
       .scaleLinear()
       .domain([domainMin, domainMax])
       .range([leftMargin, leftMargin + newWidth]);
 
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     (histogramCache as any).bins = col.histogram(numBins, [
       domainMin,
       domainMax,
     ]);
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     /* memoized */ (histogramCache as any).binWidth =
       (domainMax - domainMin) / numBins;
 
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     (histogramCache as any).binStart = (i: any) =>
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       domainMin + i * (histogramCache as any).binWidth;
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     (histogramCache as any).binEnd = (i: any) =>
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       domainMin + (i + 1) * (histogramCache as any).binWidth;
 
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     const yMax = (histogramCache as any).bins.reduce((l: any, r: any) =>
       l > r ? l : r
     );
 
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     (histogramCache as any).y = d3
       .scaleLinear()
       .domain([0, yMax])
@@ -329,6 +365,7 @@ class HistogramBrush extends React.PureComponent {
     return histogramCache;
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   createQuery() {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'isObs' does not exist on type 'Readonly<... Remove this comment to see the full error message
     const { isObs, isGeneSetSummary, field, setGenes, annoMatrix } = this.props;
@@ -366,6 +403,7 @@ class HistogramBrush extends React.PureComponent {
     ];
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     const {
       // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
@@ -425,6 +463,7 @@ class HistogramBrush extends React.PureComponent {
         </Async.Rejected>
         <Async.Fulfilled>
           {(asyncProps) =>
+            // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
             (asyncProps as any).OK2Render ? (
               <div
                 id={`histogram_${fieldForId}`}
@@ -456,11 +495,14 @@ class HistogramBrush extends React.PureComponent {
                 <Histogram
                   field={field}
                   fieldForId={fieldForId}
+                  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
                   display={(asyncProps as any).isSingleValue ? "none" : "block"}
                   histogram={
                     mini
-                      ? (asyncProps as any).miniHistogram
+                      ? // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
-                      : (asyncProps as any).histogram
+                        (asyncProps as any).miniHistogram
+                      : // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
+                        (asyncProps as any).histogram
                   }
                   width={width}
                   height={mini ? HEIGHT_MINI : HEIGHT}
@@ -477,10 +519,15 @@ class HistogramBrush extends React.PureComponent {
                     isGeneSetSummary={isGeneSetSummary}
                     isObs={isObs}
                     displayName={field}
+                    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
                     hideRanges={(asyncProps as any).isSingleValue}
+                    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
                     rangeMin={(asyncProps as any).unclippedRange[0]}
+                    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
                     rangeMax={(asyncProps as any).unclippedRange[1]}
+                    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
                     rangeColorMin={(asyncProps as any).unclippedRangeColor[0]}
+                    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
                     rangeColorMax={(asyncProps as any).unclippedRangeColor[1]}
                   />
                 )}

client/src/components/brushableHistogram/loading.tsx

@@ -3,6 +3,7 @@ import { Button } from "@blueprintjs/core";
 
 import * as globals from "../../globals";
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 const StillLoading = ({ zebra, displayName }: any) => {
   /*
     Render a loading indicator for the field.

client/src/components/categorical/annoSelect.tsx

@@ -2,14 +2,18 @@ import React from "react";
 import { Button, MenuItem } from "@blueprintjs/core";
 import { Select } from "@blueprintjs/select";
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 type State = any;
 
+// eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
 class DuplicateCategorySelect extends React.PureComponent<{}, State> {
+  // eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
   constructor(props: {}) {
     super(props);
     this.state = {};
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     const {
       // @ts-expect-error ts-migrate(2339) FIXME: Property 'allCategoryNames' does not exist on type... Remove this comment to see the full error message

client/src/components/categorical/category/annoDialogAddLabel.tsx

@@ -5,15 +5,21 @@ import LabelInput from "../../labelInput";
 import { labelPrompt, isLabelErroneous } from "../labelUtil";
 import actions from "../../../actions";
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 type State = any;
 
 // @ts-expect-error ts-migrate(1238) FIXME: Unable to resolve signature of class decorator whe... Remove this comment to see the full error message
 @connect((state) => ({
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   annotations: (state as any).annotations,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   schema: (state as any).annoMatrix?.schema,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   obsCrossfilter: (state as any).obsCrossfilter,
 }))
+// eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
 class Category extends React.PureComponent<{}, State> {
+  // eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
   constructor(props: {}) {
     super(props);
     this.state = {
@@ -21,6 +27,7 @@ class Category extends React.PureComponent<{}, State> {
     };
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   disableAddNewLabelMode = (e: any) => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch } = this.props;
@@ -33,6 +40,7 @@ class Category extends React.PureComponent<{}, State> {
     if (e) e.preventDefault();
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleAddNewLabelToCategory = (e: any) => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, metadataField } = this.props;
@@ -49,6 +57,7 @@ class Category extends React.PureComponent<{}, State> {
     e.preventDefault();
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   addLabelAndAssignCells = (e: any) => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, metadataField } = this.props;
@@ -61,20 +70,24 @@ class Category extends React.PureComponent<{}, State> {
     e.preventDefault();
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   labelNameError = (name: any) => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'metadataField' does not exist on type 'R... Remove this comment to see the full error message
     const { metadataField, schema } = this.props;
     return isLabelErroneous(name, metadataField, schema);
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   instruction = (label: any) => {
     return labelPrompt(this.labelNameError(label), "New, unique label", ":");
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleChangeOrSelect = (label: any) => {
     this.setState({ newLabelText: label });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     const { newLabelText } = this.state;
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'metadataField' does not exist on type 'R... Remove this comment to see the full error message

client/src/components/categorical/category/annoDialogEditCategoryName.tsx

@@ -7,14 +7,19 @@ import { labelPrompt } from "../labelUtil";
 import { AnnotationsHelpers } from "../../../util/stateManager";
 import actions from "../../../actions";
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 type State = any;
 
 // @ts-expect-error ts-migrate(1238) FIXME: Unable to resolve signature of class decorator whe... Remove this comment to see the full error message
 @connect((state) => ({
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   annotations: (state as any).annotations,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   schema: (state as any).annoMatrix?.schema,
 }))
+// eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
 class AnnoDialogEditCategoryName extends React.PureComponent<{}, State> {
+  // eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
   constructor(props: {}) {
     super(props);
     this.state = {
@@ -23,12 +28,14 @@ class AnnoDialogEditCategoryName extends React.PureComponent<{}, State> {
     };
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleChangeOrSelect = (name: any) => {
     this.setState({
       newCategoryText: name,
     });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   disableEditCategoryMode = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, metadataField } = this.props;
@@ -38,6 +45,7 @@ class AnnoDialogEditCategoryName extends React.PureComponent<{}, State> {
     this.setState({ newCategoryText: metadataField });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleEditCategory = (e: any) => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, metadataField } = this.props;
@@ -49,6 +57,7 @@ class AnnoDialogEditCategoryName extends React.PureComponent<{}, State> {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'schema' does not exist on type 'Readonly... Remove this comment to see the full error message
     const { schema } = this.props;
     const allCategoryNames = schema.annotations.obs.columns.map(
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (c: any) => c.name
     );
     if (
@@ -66,6 +75,7 @@ class AnnoDialogEditCategoryName extends React.PureComponent<{}, State> {
     e.preventDefault();
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   editedCategoryNameError = (name: any) => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'metadataField' does not exist on type 'R... Remove this comment to see the full error message
     const { metadataField } = this.props;
@@ -82,6 +92,7 @@ class AnnoDialogEditCategoryName extends React.PureComponent<{}, State> {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'schema' does not exist on type 'Readonly... Remove this comment to see the full error message
     const { schema } = this.props;
     const allCategoryNames = schema.annotations.obs.columns.map(
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (c: any) => c.name
     );
     const categoryNameAlreadyExists = allCategoryNames.indexOf(name) > -1;
@@ -93,6 +104,7 @@ class AnnoDialogEditCategoryName extends React.PureComponent<{}, State> {
     return false;
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   instruction = (name: any) => {
     return labelPrompt(
       this.editedCategoryNameError(name),
@@ -101,12 +113,15 @@ class AnnoDialogEditCategoryName extends React.PureComponent<{}, State> {
     );
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   allCategoryNames() {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'schema' does not exist on type 'Readonly... Remove this comment to see the full error message
     const { schema } = this.props;
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     return schema.annotations.obs.columns.map((c: any) => c.name);
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     const { newCategoryText } = this.state;
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'metadataField' does not exist on type 'R... Remove this comment to see the full error message

client/src/components/categorical/category/annoMenuCategory.tsx

@@ -16,18 +16,23 @@ import { IconNames } from "@blueprintjs/icons";
 import * as globals from "../../../globals";
 import actions from "../../../actions";
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 type State = any;
 
 // @ts-expect-error ts-migrate(1238) FIXME: Unable to resolve signature of class decorator whe... Remove this comment to see the full error message
 @connect((state) => ({
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   annotations: (state as any).annotations,
 }))
+// eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
 class AnnoMenuCategory extends React.PureComponent<{}, State> {
+  // eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
   constructor(props: {}) {
     super(props);
     this.state = {};
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   activateAddNewLabelMode = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, metadataField } = this.props;
@@ -37,6 +42,7 @@ class AnnoMenuCategory extends React.PureComponent<{}, State> {
     });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   activateEditCategoryMode = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, metadataField } = this.props;
@@ -46,12 +52,14 @@ class AnnoMenuCategory extends React.PureComponent<{}, State> {
     });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleDeleteCategory = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, metadataField } = this.props;
     dispatch(actions.annotationDeleteCategoryAction(metadataField));
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     const {
       // @ts-expect-error ts-migrate(2339) FIXME: Property 'metadataField' does not exist on type 'R... Remove this comment to see the full error message

client/src/components/categorical/category/index.tsx

@@ -33,35 +33,47 @@ const LABEL_WIDTH_ANNO = LABEL_WIDTH - ANNO_BUTTON_WIDTH;
 
 // @ts-expect-error ts-migrate(1238) FIXME: Unable to resolve signature of class decorator whe... Remove this comment to see the full error message
 @connect((state, ownProps) => {
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   const schema = (state as any).annoMatrix?.schema;
   // @ts-expect-error ts-migrate(2339) FIXME: Property 'metadataField' does not exist on type '{... Remove this comment to see the full error message
   const { metadataField } = ownProps;
   const isUserAnno = schema?.annotations?.obsByName[metadataField]?.writable;
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   const categoricalSelection = (state as any).categoricalSelection?.[
     metadataField
   ];
   return {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     colors: (state as any).colors,
     categoricalSelection,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     annotations: (state as any).annotations,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     annoMatrix: (state as any).annoMatrix,
     schema,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     crossfilter: (state as any).obsCrossfilter,
     isUserAnno,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     genesets: (state as any).genesets.genesets,
   };
 })
 class Category extends React.PureComponent {
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   static getSelectionState(
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     categoricalSelection: any,
     // @ts-expect-error ts-migrate(6133) FIXME: 'metadataField' is declared but its value is never... Remove this comment to see the full error message
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     metadataField: any,
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     categorySummary: any
   ) {
     // total number of categories in this dimension
     const totalCatCount = categorySummary.numCategoryValues;
     // number of selected options in this category
     const selectedCatCount = categorySummary.categoryValues.reduce(
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (res: any, label: any) =>
         categoricalSelection.get(label) ?? true ? res + 1 : res,
       0
@@ -73,12 +85,14 @@ class Category extends React.PureComponent {
       : "some";
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   static watchAsync(props: any, prevProps: any) {
     return !shallowEqual(props.watchProps, prevProps.watchProps);
   }
 
   createCategorySummaryFromDfCol = memoize(createCategorySummaryFromDfCol);
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   getSelectionState(categorySummary: any) {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'categoricalSelection' does not exist on ... Remove this comment to see the full error message
     const { categoricalSelection, metadataField } = this.props;
@@ -89,6 +103,7 @@ class Category extends React.PureComponent {
     );
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleColorChange = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, metadataField } = this.props;
@@ -98,6 +113,7 @@ class Category extends React.PureComponent {
     });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleCategoryClick = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'annotations' does not exist on type 'Rea... Remove this comment to see the full error message
     const { annotations, metadataField, onExpansionChange } = this.props;
@@ -109,12 +125,14 @@ class Category extends React.PureComponent {
     }
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleCategoryKeyPress = (e: any) => {
     if (e.key === "Enter") {
       this.handleCategoryClick();
     }
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleToggleAllClick = (categorySummary: any) => {
     const isChecked = this.getSelectionState(categorySummary);
     if (isChecked === "all") {
@@ -124,6 +142,7 @@ class Category extends React.PureComponent {
     }
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   fetchAsyncProps = async (props: any) => {
     const { annoMatrix, metadataField, colors } = props.watchProps;
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'crossfilter' does not exist on type 'Rea... Remove this comment to see the full error message
@@ -146,6 +165,7 @@ class Category extends React.PureComponent {
     };
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   async fetchData(annoMatrix: any, metadataField: any, colors: any) {
     /*
     fetch our data and the color-by data if appropriate, and then build a summary
@@ -180,6 +200,7 @@ class Category extends React.PureComponent {
     return [categoryData, categorySummary, colorData];
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   updateColorTable(colorData: any) {
     // color table, which may be null
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'schema' does not exist on type 'Readonly... Remove this comment to see the full error message
@@ -199,6 +220,7 @@ class Category extends React.PureComponent {
     };
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   toggleNone(categorySummary: any) {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, metadataField } = this.props;
@@ -212,6 +234,7 @@ class Category extends React.PureComponent {
     );
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   toggleAll(categorySummary: any) {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, metadataField } = this.props;
@@ -225,6 +248,7 @@ class Category extends React.PureComponent {
     );
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     const {
       // @ts-expect-error ts-migrate(2339) FIXME: Property 'metadataField' does not exist on type 'R... Remove this comment to see the full error message
@@ -319,6 +343,7 @@ class Category extends React.PureComponent {
 
 export default Category;
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 const StillLoading = ({ metadataField, checkboxID }: any) => {
   /*
   We are still loading this category, so render a "busy" signal.
@@ -370,6 +395,7 @@ const StillLoading = ({ metadataField, checkboxID }: any) => {
   );
 };
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 const ErrorLoading = ({ metadataField, error }: any) => {
   console.error(error); // log error to console as it is unexpected.
   return (

client/src/components/categorical/index.tsx

@@ -10,16 +10,22 @@ import LabelInput from "../labelInput";
 import { labelPrompt } from "./labelUtil";
 import actions from "../../actions";
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 type State = any;
 
 // @ts-expect-error ts-migrate(1238) FIXME: Unable to resolve signature of class decorator whe... Remove this comment to see the full error message
 @connect((state) => ({
   writableCategoriesEnabled:
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     (state as any).config?.parameters?.annotations ?? false,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   schema: (state as any).annoMatrix?.schema,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   userInfo: (state as any).userInfo,
 }))
+// eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
 class Categories extends React.Component<{}, State> {
+  // eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
   constructor(props: {}) {
     super(props);
     this.state = {
@@ -30,6 +36,7 @@ class Categories extends React.Component<{}, State> {
     };
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleCreateUserAnno = (e: any) => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch } = this.props;
@@ -48,10 +55,12 @@ class Categories extends React.Component<{}, State> {
     e.preventDefault();
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleEnableAnnoMode = () => {
     this.setState({ createAnnoModeActive: true });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleDisableAnnoMode = () => {
     this.setState({
       createAnnoModeActive: false,
@@ -60,10 +69,12 @@ class Categories extends React.Component<{}, State> {
     });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleModalDuplicateCategorySelection = (d: any) => {
     this.setState({ categoryToDuplicate: d });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   categoryNameError = (name: any) => {
     /*
         return false if this is a LEGAL/acceptable category name or NULL/empty string,
@@ -78,6 +89,7 @@ class Categories extends React.Component<{}, State> {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'schema' does not exist on type 'Readonly... Remove this comment to see the full error message
     const { schema } = this.props;
     const allCategoryNames = schema.annotations.obs.columns.map(
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (c: any) => c.name
     );
     /* check category name syntax */
@@ -93,14 +105,17 @@ class Categories extends React.Component<{}, State> {
     return false;
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleChange = (name: any) => {
     this.setState({ newCategoryText: name });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleSelect = (name: any) => {
     this.setState({ newCategoryText: name });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   instruction = (name: any) => {
     return labelPrompt(
       this.categoryNameError(name),
@@ -109,6 +124,7 @@ class Categories extends React.Component<{}, State> {
     );
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   onExpansionChange = (catName: any) => {
     const { expandedCats } = this.state;
     if (expandedCats.has(catName)) {
@@ -122,6 +138,7 @@ class Categories extends React.Component<{}, State> {
     }
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     const {
       createAnnoModeActive,
@@ -180,7 +197,6 @@ class Categories extends React.Component<{}, State> {
             />
           }
         />
-
         {writableCategoriesEnabled ? (
           <div style={{ marginBottom: 10 }}>
             <Tooltip
@@ -209,9 +225,9 @@ class Categories extends React.Component<{}, State> {
             </Tooltip>
           </div>
         ) : null}
-
         {/* READ ONLY CATEGORICAL FIELDS */}
         {/* this is duplicative but flat, could be abstracted */}
+        {/* eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS */}
         {allCategoryNames.map((catName: any) =>
           !schema.annotations.obsByName[catName].writable &&
           (schema.annotations.obsByName[catName].categories?.length > 1 ||
@@ -227,6 +243,7 @@ class Categories extends React.Component<{}, State> {
           ) : null
         )}
         {/* WRITEABLE FIELDS */}
+        {/* eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS */}
         {allCategoryNames.map((catName: any) =>
           schema.annotations.obsByName[catName].writable ? (
             <Category

client/src/components/categorical/labelUtil.tsx

@@ -3,6 +3,7 @@ import { Colors } from "@blueprintjs/core";
 
 import { AnnotationsHelpers } from "../../util/stateManager";
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export function isLabelErroneous(label: any, metadataField: any, schema: any) {
   /*
     return false if this is a LEGAL/acceptable category name or NULL/empty string,
@@ -35,6 +36,7 @@ const errorMessageMap = {
   "multi-space-run": "Multiple consecutive spaces not allowed",
 };
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export function labelPrompt(err: any, prolog: any, epilog: any) {
   let errPrompt = null;
   if (err) {

client/src/components/categorical/value/index.tsx

@@ -30,6 +30,7 @@ const STACKED_BAR_HEIGHT = 11;
 const STACKED_BAR_WIDTH = 100;
 
 /* this is defined outside of the class so we can use it in connect() */
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function _currentLabelAsString(ownProps: any) {
   const { label } = ownProps;
   // when called as a function, the String() constructor performs type conversion,
@@ -37,6 +38,7 @@ function _currentLabelAsString(ownProps: any) {
   return String(label);
 }
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 type State = any;
 
 // @ts-expect-error ts-migrate(1238) FIXME: Unable to resolve signature of class decorator whe... Remove this comment to see the full error message
@@ -54,14 +56,18 @@ type State = any;
   const isSelected = category.get(label) ?? true;
 
   return {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     annotations: (state as any).annotations,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     schema: (state as any).annoMatrix?.schema,
     isDilated,
     isSelected,
     label,
   };
 })
+// eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
 class CategoryValue extends React.Component<{}, State> {
+  // eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
   constructor(props: {}) {
     super(props);
     this.state = {
@@ -69,12 +75,15 @@ class CategoryValue extends React.Component<{}, State> {
     };
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
   componentDidUpdate(prevProps: {}) {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'metadataField' does not exist on type 'R... Remove this comment to see the full error message
     const { metadataField, categoryIndex, categorySummary } = this.props;
     if (
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (prevProps as any).metadataField !== metadataField ||
-      (prevProps as any).categoryIndex !== categoryIndex ||
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
+      (prevProps as any).categoryIndex !== categoryIndex || // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (prevProps as any).categorySummary !== categorySummary
     ) {
       // eslint-disable-next-line react/no-did-update-set-state --- adequately checked to prevent looping
@@ -85,6 +94,7 @@ class CategoryValue extends React.Component<{}, State> {
   }
 
   // If coloring by and this isn't the colorAccessor and it isn't being edited
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   get shouldRenderStackedBarOrHistogram() {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'colorAccessor' does not exist on type 'R... Remove this comment to see the full error message
     const { colorAccessor, isColorBy, annotations } = this.props;
@@ -92,18 +102,21 @@ class CategoryValue extends React.Component<{}, State> {
     return !!colorAccessor && !isColorBy && !annotations.isEditingLabelName;
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleDeleteValue = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, metadataField, label } = this.props;
     dispatch(actions.annotationDeleteLabelFromCategory(metadataField, label));
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleAddCurrentSelectionToThisLabel = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, metadataField, label } = this.props;
     dispatch(actions.annotationLabelCurrentSelection(metadataField, label));
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleEditValue = (e: any) => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, metadataField, label } = this.props;
@@ -119,6 +132,7 @@ class CategoryValue extends React.Component<{}, State> {
     e.preventDefault();
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleCreateArbitraryLabel = (txt: any) => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, metadataField, label } = this.props;
@@ -128,6 +142,7 @@ class CategoryValue extends React.Component<{}, State> {
     );
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   labelNameError = (name: any) => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'metadataField' does not exist on type 'R... Remove this comment to see the full error message
     const { metadataField, schema } = this.props;
@@ -135,10 +150,12 @@ class CategoryValue extends React.Component<{}, State> {
     return isLabelErroneous(name, metadataField, schema);
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   instruction = (label: any) => {
     return labelPrompt(this.labelNameError(label), "New, unique label", ":");
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   activateEditLabelMode = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, metadataField, categoryIndex, label } = this.props;
@@ -150,6 +167,7 @@ class CategoryValue extends React.Component<{}, State> {
     });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   cancelEditMode = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, metadataField, categoryIndex, label } = this.props;
@@ -164,6 +182,7 @@ class CategoryValue extends React.Component<{}, State> {
     });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   toggleOff = () => {
     const {
       // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
@@ -187,6 +206,7 @@ class CategoryValue extends React.Component<{}, State> {
     );
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   shouldComponentUpdate = (nextProps: any, nextState: any) => {
     /*
     Checks to see if at least one of the following changed:
@@ -212,10 +232,13 @@ class CategoryValue extends React.Component<{}, State> {
     const valueSelectionChange = isSelected !== newIsSelected;
 
     const colorAccessorChange =
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (props as any).colorAccessor !== nextProps.colorAccessor;
     const annotationsChange =
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (props as any).annotations !== nextProps.annotations;
     const editingLabel = state.editedLabelText !== nextState.editedLabelText;
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     const dilationChange = (props as any).isDilated !== nextProps.isDilated;
 
     const count = categorySummary.categoryValueCounts[categoryIndex];
@@ -227,6 +250,7 @@ class CategoryValue extends React.Component<{}, State> {
     // if any one changes, but only for the currently colored-by category.
     const colorMightHaveChanged =
       nextProps.colorAccessor === nextProps.metadataField &&
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (props as any).categorySummary !== nextProps.categorySummary;
 
     return (
@@ -241,6 +265,7 @@ class CategoryValue extends React.Component<{}, State> {
     );
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   toggleOn = () => {
     const {
       // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
@@ -264,6 +289,7 @@ class CategoryValue extends React.Component<{}, State> {
     );
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleMouseEnter = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, metadataField, categoryIndex, label } = this.props;
@@ -275,6 +301,7 @@ class CategoryValue extends React.Component<{}, State> {
     });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleMouseExit = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, metadataField, categoryIndex, label } = this.props;
@@ -286,23 +313,33 @@ class CategoryValue extends React.Component<{}, State> {
     });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleTextChange = (text: any) => {
     this.setState({ editedLabelText: text });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleChoice = (e: any) => {
     /* Blueprint Suggest format */
     this.setState({ editedLabelText: e.target });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   createHistogramBins = (
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     metadataField: any,
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     categoryData: any,
     // @ts-expect-error ts-migrate(6133) FIXME: 'colorAccessor' is declared but its value is never... Remove this comment to see the full error message
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     colorAccessor: any,
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     colorData: any,
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     categoryValue: any,
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     width: any,
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     height: any
   ) => {
     /*
@@ -337,15 +374,24 @@ class CategoryValue extends React.Component<{}, State> {
     };
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   createStackedGraphBins = (
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     metadataField: any,
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     categoryData: any,
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     colorAccessor: any,
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     colorData: any,
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     categoryValue: any,
     // @ts-expect-error ts-migrate(6133) FIXME: 'colorTable' is declared but its value is never re... Remove this comment to see the full error message
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     colorTable: any,
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     schema: any,
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     width: any
   ) => {
     /*
@@ -383,10 +429,12 @@ class CategoryValue extends React.Component<{}, State> {
     return null;
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   currentLabelAsString() {
     return _currentLabelAsString(this.props);
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   isAddCurrentSelectionDisabled(crossfilter: any, category: any, value: any) {
     /*
     disable "add current selection to label", if one of the following is true:
@@ -411,6 +459,7 @@ class CategoryValue extends React.Component<{}, State> {
     return false;
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   renderMiniStackedBar = () => {
     const {
       // @ts-expect-error ts-migrate(2339) FIXME: Property 'colorAccessor' does not exist on type 'R... Remove this comment to see the full error message
@@ -470,6 +519,7 @@ class CategoryValue extends React.Component<{}, State> {
     );
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   renderMiniHistogram = () => {
     const {
       // @ts-expect-error ts-migrate(2339) FIXME: Property 'colorAccessor' does not exist on type 'R... Remove this comment to see the full error message
@@ -528,6 +578,7 @@ class CategoryValue extends React.Component<{}, State> {
     );
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     const {
       // @ts-expect-error ts-migrate(2339) FIXME: Property 'metadataField' does not exist on type 'R... Remove this comment to see the full error message

client/src/components/categorical/value/occupancy.tsx

@@ -10,15 +10,18 @@ import {
 
 // @ts-expect-error ts-migrate(1238) FIXME: Unable to resolve signature of class decorator whe... Remove this comment to see the full error message
 @connect((state) => ({
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   schema: (state as any).annoMatrix?.schema,
 }))
 class Occupancy extends React.PureComponent {
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   canvas: any;
 
   _WIDTH = 100;
 
   _HEIGHT = 11;
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   createHistogram = () => {
     /*
           Knowing that colorScale is based off continous data,
@@ -68,6 +71,7 @@ class Occupancy extends React.PureComponent {
     }
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   createOccupancyStack = () => {
     /*
           Knowing that the color scale is based off of catagorical data,
@@ -126,6 +130,7 @@ class Occupancy extends React.PureComponent {
     }
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'colorAccessor' does not exist on type 'R... Remove this comment to see the full error message
     const { colorAccessor, categoryValue, colorByIsCategorical } = this.props;

client/src/components/continuous/continuous.tsx

@@ -6,9 +6,11 @@ import HistogramBrush from "../brushableHistogram";
 
 // @ts-expect-error ts-migrate(1238) FIXME: Unable to resolve signature of class decorator whe... Remove this comment to see the full error message
 @connect((state) => ({
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   schema: (state as any).annoMatrix?.schema,
 }))
 class Continuous extends React.PureComponent {
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     /* initial value for iterator to simulate index, ranges is an object */
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'schema' does not exist on type 'Readonly... Remove this comment to see the full error message
@@ -16,12 +18,17 @@ class Continuous extends React.PureComponent {
     if (!schema) return null;
     const obsIndex = schema.annotations.obs.index;
     const allContinuousNames = schema.annotations.obs.columns
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       .filter((col: any) => col.type === "int32" || col.type === "float32")
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       .filter((col: any) => col.name !== obsIndex)
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       .filter((col: any) => !col.writable) // skip user annotations - they will be treated as categorical
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       .map((col: any) => col.name);
     return (
       <div>
+        {/* eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS. */}
         {allContinuousNames.map((key: any, zebra: any) => (
           // @ts-expect-error ts-migrate(2769) FIXME: No overload matches this call.
           <HistogramBrush key={key} field={key} isObs zebra={zebra % 2 === 0} />

client/src/components/continuous/setupParallelCoordinates.ts

@@ -5,6 +5,7 @@
 ******************************************/
 import * as d3 from "d3";
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 const setupParallelCoordinates = (width: any, height: any, margin: any) => {
   const container = d3.select("#parcoords");
 

client/src/components/continuous/util.ts

@@ -12,13 +12,16 @@ export const innerHeight = height - 2;
 
 export const devicePixelRatio = window.devicePixelRatio || 1;
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export const createDimensions = (data: any) => {
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   const newArr: any = [];
   each(data, (value, key) => {
     if (value.range) {
       newArr.push({
         key /* room for confusion: lodash calls this key, it's also the name of the property parallel coords code is looking for */,
         type: {
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           within: (d: any, extent: any, dim: any) =>
             extent[0] <= dim.scale(d) && dim.scale(d) <= extent[1],
         },
@@ -35,13 +38,17 @@ export const createDimensions = (data: any) => {
 // @ts-expect-error ts-migrate(2554) FIXME: Expected 1 arguments, but got 0.
 export const yAxis = d3.axisLeft();
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
 export const brushstart = () => {
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   (d3 as any).event.sourceEvent.stopPropagation();
 };
 
 // Unused.
 // export const d3_functor = v => (typeof v === "function" ? v : () => v);
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export const project = (d: any, dimensions: any, xscale: any) =>
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   dimensions.map((p: any, i: any) => {
     // check if data element has property and contains a value
     if (!(p.key in d) || d[p.key] === null) return null;

client/src/components/continuousLegend/index.tsx

@@ -9,6 +9,7 @@ import {
 } from "../../util/stateManager/colorHelpers";
 
 // create continuous color legend
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 const continuous = (selectorId: any, colorScale: any, colorAccessor: any) => {
   const legendHeight = 200;
   const legendWidth = 80;
@@ -110,11 +111,15 @@ const continuous = (selectorId: any, colorScale: any, colorAccessor: any) => {
 
 // @ts-expect-error ts-migrate(1238) FIXME: Unable to resolve signature of class decorator whe... Remove this comment to see the full error message
 @connect((state) => ({
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   annoMatrix: (state as any).annoMatrix,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   colors: (state as any).colors,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   genesets: (state as any).genesets.genesets,
 }))
 class ContinuousLegend extends React.Component {
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   async componentDidUpdate(prevProps: any) {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'annoMatrix' does not exist on type 'Read... Remove this comment to see the full error message
     const { annoMatrix, colors, genesets } = this.props;
@@ -157,6 +162,7 @@ class ContinuousLegend extends React.Component {
     }
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     return (
       <div

client/src/components/embedding/index.tsx

@@ -15,28 +15,36 @@ import * as globals from "../../globals";
 import actions from "../../actions";
 import { getDiscreteCellEmbeddingRowIndex } from "../../util/stateManager/viewStackHelpers";
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 type EmbeddingState = any;
 
 // @ts-expect-error ts-migrate(1238) FIXME: Unable to resolve signature of class decorator whe... Remove this comment to see the full error message
 @connect((state) => {
   return {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     layoutChoice: (state as any).layoutChoice,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     schema: (state as any).annoMatrix?.schema,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     crossfilter: (state as any).obsCrossfilter,
   };
 })
+// eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
 class Embedding extends React.PureComponent<{}, EmbeddingState> {
+  // eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
   constructor(props: {}) {
     super(props);
     this.state = {};
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleLayoutChoiceChange = (e: any) => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch } = this.props;
     dispatch(actions.layoutChoiceAction(e.currentTarget.value));
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'layoutChoice' does not exist on type 'Re... Remove this comment to see the full error message
     const { layoutChoice, schema, crossfilter } = this.props;
@@ -105,8 +113,10 @@ class Embedding extends React.PureComponent<{}, EmbeddingState> {
 
 export default Embedding;
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 const loadAllEmbeddingCounts = async ({ annoMatrix, available }: any) => {
   const embeddings = await Promise.all(
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     available.map((name: any) => annoMatrix.base().fetch("emb", name))
   );
   // @ts-expect-error ts-migrate(7006) FIXME: Parameter 'name' implicitly has an 'any' type.
@@ -117,6 +127,7 @@ const loadAllEmbeddingCounts = async ({ annoMatrix, available }: any) => {
   }));
 };
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 const EmbeddingChoices = ({ onChange, annoMatrix, layoutChoice }: any) => {
   const { available } = layoutChoice;
   const { data, error, isPending } = useAsync({
@@ -133,6 +144,7 @@ const EmbeddingChoices = ({ onChange, annoMatrix, layoutChoice }: any) => {
     /* still loading, or errored out - just omit counts (TODO: spinner?) */
     return (
       <RadioGroup onChange={onChange} selectedValue={layoutChoice.current}>
+        {/* eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS. */}
         {layoutChoice.available.map((name: any) => (
           <Radio label={`${name}`} value={name} key={name} />
         ))}
@@ -142,6 +154,7 @@ const EmbeddingChoices = ({ onChange, annoMatrix, layoutChoice }: any) => {
   if (data) {
     return (
       <RadioGroup onChange={onChange} selectedValue={layoutChoice.current}>
+        {/* eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS. */}
         {data.map((summary: any) => {
           const { discreteCellIndex, embeddingName } = summary;
           const sizeHint = `${discreteCellIndex.size()} cells`;

client/src/components/framework/container.tsx

@@ -1,5 +1,6 @@
 import React from "react";
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 function Container(props: any) {
   const { children } = props;
   return (

client/src/components/framework/layout.tsx

@@ -2,6 +2,7 @@ import React from "react";
 import * as globals from "../../globals";
 
 class Layout extends React.Component {
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   viewportRef: any;
   /*
     Layout - this react component contains all the layout style and logic for the application once it has loaded.
@@ -14,6 +15,7 @@ class Layout extends React.Component {
     should be.
   */
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   componentDidMount() {
     /*
       This is a bit of a hack. In order for the graph to size correctly, it needs to know the size of the parent
@@ -22,6 +24,7 @@ class Layout extends React.Component {
     this.forceUpdate();
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     const { children } = this.props;
     // @ts-expect-error ts-migrate(2488) FIXME: Type 'ReactNode' must have a '[Symbol.iterator]()'... Remove this comment to see the full error message

client/src/components/framework/logo.tsx

@@ -1,6 +1,7 @@
 import React from "react";
 import * as globals from "../../globals";
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 const Logo = (props: any) => {
   const { size } = props;
   return (

client/src/components/framework/toasters.ts

@@ -11,6 +11,7 @@ const ToastTopCenter = Toaster.create({
 /*
 A "user" error - eg, bad input
 */
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export const postUserErrorToast = (message: any) =>
   ToastTopCenter.show({ message, intent: Intent.WARNING });
 
@@ -18,12 +19,14 @@ export const postUserErrorToast = (message: any) =>
 A toast the user must dismiss manually, because they need to act on its information,
 ie., 8 bulk add genes out of 40 were bad. Manually see which ones and fix.
 */
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export const keepAroundErrorToast = (message: any) =>
   ToastTopCenter.show({ message, timeout: 0, intent: Intent.WARNING });
 
 /*
 a hard network error
 */
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export const postNetworkErrorToast = (message: any, key = undefined) =>
   ToastTopCenter.show(
     {
@@ -37,6 +40,7 @@ export const postNetworkErrorToast = (message: any, key = undefined) =>
 /*
 Async message to user
 */
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export const postAsyncSuccessToast = (message: any) =>
   ToastTopCenter.show({
     message,
@@ -44,6 +48,7 @@ export const postAsyncSuccessToast = (message: any) =>
     intent: Intent.SUCCESS,
   });
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export const postAsyncFailureToast = (message: any) =>
   ToastTopCenter.show({
     message,

client/src/components/geneExpression/gene.tsx

@@ -9,6 +9,7 @@ import actions from "../../actions";
 
 const MINI_HISTOGRAM_WIDTH = 110;
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 type State = any;
 
 // @ts-expect-error ts-migrate(1238) FIXME: Unable to resolve signature of class decorator whe... Remove this comment to see the full error message
@@ -17,14 +18,19 @@ type State = any;
   const { gene } = ownProps;
 
   return {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     isColorAccessor: (state as any).colors.colorAccessor === gene,
     isScatterplotXXaccessor:
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (state as any).controls.scatterplotXXaccessor === gene,
     isScatterplotYYaccessor:
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (state as any).controls.scatterplotYYaccessor === gene,
   };
 })
+// eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
 class Gene extends React.Component<{}, State> {
+  // eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
   constructor(props: {}) {
     super(props);
     this.state = {
@@ -32,17 +38,20 @@ class Gene extends React.Component<{}, State> {
     };
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   onColorChangeClick = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, gene } = this.props;
     dispatch(actions.requestSingleGeneExpressionCountsForColoringPOST(gene));
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleGeneExpandClick = () => {
     const { geneIsExpanded } = this.state;
     this.setState({ geneIsExpanded: !geneIsExpanded });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleSetGeneAsScatterplotX = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, gene } = this.props;
@@ -52,6 +61,7 @@ class Gene extends React.Component<{}, State> {
     });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleSetGeneAsScatterplotY = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, gene } = this.props;
@@ -61,12 +71,14 @@ class Gene extends React.Component<{}, State> {
     });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleDeleteGeneFromSet = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, gene, geneset } = this.props;
     dispatch(actions.genesetDeleteGenes(geneset, [gene]));
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     const {
       // @ts-expect-error ts-migrate(2339) FIXME: Property 'gene' does not exist on type 'Readonly<{... Remove this comment to see the full error message

client/src/components/geneExpression/geneSet.tsx

@@ -9,9 +9,12 @@ import HistogramBrush from "../brushableHistogram";
 
 import { diffexpPopNamePrefix1, diffexpPopNamePrefix2 } from "../../globals";
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 type State = any;
 
+// eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
 class GeneSet extends React.Component<{}, State> {
+  // eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
   constructor(props: {}) {
     super(props);
     this.state = {
@@ -19,11 +22,13 @@ class GeneSet extends React.Component<{}, State> {
     };
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   onGenesetMenuClick = () => {
     const { isOpen } = this.state;
     this.setState({ isOpen: !isOpen });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   renderGenes() {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'setName' does not exist on type 'Readonl... Remove this comment to see the full error message
     const { setName, setGenes } = this.props;
@@ -46,6 +51,7 @@ class GeneSet extends React.Component<{}, State> {
     );
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'setName' does not exist on type 'Readonl... Remove this comment to see the full error message
     const { setName, genesetDescription, setGenes } = this.props;

client/src/components/geneExpression/index.tsx

@@ -7,20 +7,25 @@ import GeneSet from "./geneSet";
 import QuickGene from "./quickGene";
 import CreateGenesetDialogue from "./menus/createGenesetDialogue";
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 type State = any;
 
 // @ts-expect-error ts-migrate(1238) FIXME: Unable to resolve signature of class decorator whe... Remove this comment to see the full error message
 @connect((state) => {
   return {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     genesets: (state as any).genesets.genesets,
   };
 })
+// eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
 class GeneExpression extends React.Component<{}, State> {
+  // eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
   constructor(props: {}) {
     super(props);
     this.state = { geneSetsExpanded: true };
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   renderGeneSets = () => {
     const sets = [];
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'genesets' does not exist on type 'Readon... Remove this comment to see the full error message
@@ -40,24 +45,29 @@ class GeneExpression extends React.Component<{}, State> {
     return sets;
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleActivateCreateGenesetMode = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch } = this.props;
     const { geneSetsExpanded } = this.state;
     dispatch({ type: "geneset: activate add new geneset mode" });
     if (!geneSetsExpanded) {
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       this.setState((state: any) => {
         return { ...state, geneSetsExpanded: true };
       });
     }
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleExpandGeneSets = () => {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     this.setState((state: any) => {
       return { ...state, geneSetsExpanded: !state.geneSetsExpanded };
     });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     const { geneSetsExpanded } = this.state;
     return (

client/src/components/geneExpression/menus/addGeneToGenesetDialogue.tsx

@@ -5,13 +5,17 @@ import LabelInput from "../../labelInput";
 import parseBulkGeneString from "../../../util/parseBulkGeneString";
 import actions from "../../../actions";
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 type State = any;
 
 // @ts-expect-error ts-migrate(1238) FIXME: Unable to resolve signature of class decorator whe... Remove this comment to see the full error message
 @connect((state) => ({
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   genesetsUI: (state as any).genesetsUI,
 }))
+// eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
 class AddGeneToGenesetDialogue extends React.PureComponent<{}, State> {
+  // eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
   constructor(props: {}) {
     super(props);
     this.state = {
@@ -19,6 +23,7 @@ class AddGeneToGenesetDialogue extends React.PureComponent<{}, State> {
     };
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   disableAddGeneMode = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch } = this.props;
@@ -27,10 +32,12 @@ class AddGeneToGenesetDialogue extends React.PureComponent<{}, State> {
     });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleAddGeneToGeneSet = (e: any) => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'geneset' does not exist on type 'Readonl... Remove this comment to see the full error message
     const { geneset, dispatch } = this.props;
     const { genesToAdd } = this.state;
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     const genesTmpHardcodedFormat: any = [];
     const genesArrayFromString = parseBulkGeneString(genesToAdd);
     genesArrayFromString.forEach((_gene) => {
@@ -45,10 +52,12 @@ class AddGeneToGenesetDialogue extends React.PureComponent<{}, State> {
     if (e) e.preventDefault();
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleChange = (e: any) => {
     this.setState({ genesToAdd: e });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'geneset' does not exist on type 'Readonl... Remove this comment to see the full error message
     const { geneset, genesetsUI } = this.props;

client/src/components/geneExpression/menus/addGenes.tsx

@@ -20,6 +20,7 @@ import {
 import { memoize } from "../../../util/dataframe/util";
 import parseBulkGeneString from "../../../util/parseBulkGeneString";
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 const renderGene = (fuzzySortResult: any, { handleClick, modifiers }: any) => {
   if (!modifiers.matchesPredicate) {
     return null;
@@ -33,6 +34,7 @@ const renderGene = (fuzzySortResult: any, { handleClick, modifiers }: any) => {
       disabled={modifiers.disabled}
       data-testid={`suggest-menu-item-${geneName}`}
       key={geneName}
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       onClick={(g: any /* this fires when user clicks a menu item */) =>
         handleClick(g)
       }
@@ -41,6 +43,7 @@ const renderGene = (fuzzySortResult: any, { handleClick, modifiers }: any) => {
   );
 };
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 const filterGenes = (query: any, genes: any) =>
   /* fires on load, once, and then for each character typed into the input */
   fuzzysort.go(query, genes, {
@@ -48,17 +51,23 @@ const filterGenes = (query: any, genes: any) =>
     threshold: -10000, // don't return bad results
   });
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 type AddGenesState = any;
 
 // @ts-expect-error ts-migrate(1238) FIXME: Unable to resolve signature of class decorator whe... Remove this comment to see the full error message
 @connect((state) => {
   return {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     annoMatrix: (state as any).annoMatrix,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     userDefinedGenes: (state as any).controls.userDefinedGenes,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     userDefinedGenesLoading: (state as any).controls.userDefinedGenesLoading,
   };
 })
+// eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
 class AddGenes extends React.Component<{}, AddGenesState> {
+  // eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
   constructor(props: {}) {
     super(props);
     this.state = {
@@ -70,15 +79,18 @@ class AddGenes extends React.Component<{}, AddGenesState> {
     };
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   componentDidMount() {
     // @ts-expect-error ts-migrate(2554) FIXME: Expected 1 arguments, but got 0.
     this.updateState();
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
   componentDidUpdate(prevProps: {}) {
     this.updateState(prevProps);
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleClick(g: any) {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, userDefinedGenes } = this.props;
@@ -100,6 +112,7 @@ class AddGenes extends React.Component<{}, AddGenesState> {
     }
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   _genesToUpper = (listGenes: any) => {
     // Has to be a Map to preserve index
     const upperGenes = new Map();
@@ -110,9 +123,10 @@ class AddGenes extends React.Component<{}, AddGenesState> {
     return upperGenes;
   };
 
-  // eslint-disable-next-line react/sort-comp -- memo requires a defined _genesToUpper
+  // eslint-disable-next-line react/sort-comp, @typescript-eslint/no-explicit-any -- memo requires a defined _genesToUpper
   _memoGenesToUpper = memoize(this._genesToUpper, (arr: any) => arr);
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleBulkAddClick = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, userDefinedGenes } = this.props;
@@ -164,6 +178,7 @@ class AddGenes extends React.Component<{}, AddGenesState> {
     return undefined;
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   async updateState(prevProps: any) {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'annoMatrix' does not exist on type 'Read... Remove this comment to see the full error message
     const { annoMatrix } = this.props;
@@ -186,6 +201,7 @@ class AddGenes extends React.Component<{}, AddGenesState> {
     }
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   placeholderGeneNames() {
     /*
     return a string containing gene name suggestions for use as a user hint.
@@ -215,6 +231,7 @@ class AddGenes extends React.Component<{}, AddGenesState> {
     return "Apod, Cd74, ...";
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'userDefinedGenesLoading' does not exist ... Remove this comment to see the full error message
     const { userDefinedGenesLoading } = this.props;

client/src/components/geneExpression/menus/createGenesetDialogue.tsx

@@ -7,17 +7,25 @@ import { Tooltip2 } from "@blueprintjs/popover2";
 import LabelInput from "../../labelInput";
 import actions from "../../../actions";
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 type State = any;
 
 // @ts-expect-error ts-migrate(1238) FIXME: Unable to resolve signature of class decorator whe... Remove this comment to see the full error message
 @connect((state) => ({
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   annotations: (state as any).annotations,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   schema: (state as any).annoMatrix?.schema,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   obsCrossfilter: (state as any).obsCrossfilter,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   genesets: (state as any).genesets.genesets,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   genesetsUI: (state as any).genesetsUI,
 }))
+// eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
 class CreateGenesetDialogue extends React.PureComponent<{}, State> {
+  // eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
   constructor(props: {}) {
     super(props);
     this.state = {
@@ -27,6 +35,7 @@ class CreateGenesetDialogue extends React.PureComponent<{}, State> {
     };
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   disableCreateGenesetMode = (e: any) => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch } = this.props;
@@ -42,6 +51,7 @@ class CreateGenesetDialogue extends React.PureComponent<{}, State> {
     if (e) e.preventDefault();
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   createGeneset = (e: any) => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch } = this.props;
@@ -56,6 +66,7 @@ class CreateGenesetDialogue extends React.PureComponent<{}, State> {
       genesetDescription,
     });
     if (genesToPopulateGeneset) {
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       const genesTmpHardcodedFormat: any = [];
       const genesArrayFromString = pull(
         uniq(genesToPopulateGeneset.split(/[ ,]+/)),
@@ -78,10 +89,12 @@ class CreateGenesetDialogue extends React.PureComponent<{}, State> {
     e.preventDefault();
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   genesetNameError = () => {
     return false;
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleChange = (e: any) => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'genesets' does not exist on type 'Readon... Remove this comment to see the full error message
     const { genesets } = this.props;
@@ -89,20 +102,24 @@ class CreateGenesetDialogue extends React.PureComponent<{}, State> {
     this.validate(e, genesets);
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleGenesetInputChange = (e: any) => {
     this.setState({ genesToPopulateGeneset: e });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleDescriptionInputChange = (e: any) => {
     this.setState({ genesetDescription: e });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   instruction = (genesetName: any, genesets: any) => {
     return genesets.has(genesetName)
       ? "Gene set name must be unique."
       : "New, unique gene set name";
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   validate = (genesetName: any, genesets: any) => {
     if (genesets.has(genesetName)) {
       this.setState({
@@ -127,6 +144,7 @@ class CreateGenesetDialogue extends React.PureComponent<{}, State> {
     return true;
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     const { genesetName, nameErrorMessage } = this.state;
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'genesetsUI' does not exist on type 'Read... Remove this comment to see the full error message

client/src/components/geneExpression/menus/editGenesetNameDialogue.tsx

@@ -3,17 +3,25 @@ import { connect } from "react-redux";
 import AnnoDialog from "../../annoDialog";
 import LabelInput from "../../labelInput";
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 type State = any;
 
 // @ts-expect-error ts-migrate(1238) FIXME: Unable to resolve signature of class decorator whe... Remove this comment to see the full error message
 @connect((state) => ({
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   annotations: (state as any).annotations,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   schema: (state as any).annoMatrix?.schema,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   obsCrossfilter: (state as any).obsCrossfilter,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   genesetsUI: (state as any).genesetsUI,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   genesets: (state as any).genesets.genesets,
 }))
+// eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
 class RenameGeneset extends React.PureComponent<{}, State> {
+  // eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
   constructor(props: {}) {
     super(props);
     this.state = {
@@ -24,6 +32,7 @@ class RenameGeneset extends React.PureComponent<{}, State> {
     };
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   disableEditGenesetNameMode = (e: any) => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch } = this.props;
@@ -37,6 +46,7 @@ class RenameGeneset extends React.PureComponent<{}, State> {
     if (e) e.preventDefault();
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   renameGeneset = (e: any) => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, genesetsUI } = this.props;
@@ -55,18 +65,22 @@ class RenameGeneset extends React.PureComponent<{}, State> {
     e.preventDefault();
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   genesetNameError = () => {
     return false;
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleChange = (e: any) => {
     this.setState({ newGenesetName: e });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleChangeDescription = (e: any) => {
     this.setState({ newGenesetDescription: e });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   validate = (genesetName: any, genesets: any) => {
     return (
       !genesets.has(genesetName) &&
@@ -76,6 +90,7 @@ class RenameGeneset extends React.PureComponent<{}, State> {
     );
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     const { newGenesetName, newGenesetDescription } = this.state;
     const {

client/src/components/geneExpression/menus/genesetMenus.tsx

@@ -17,21 +17,27 @@ import * as globals from "../../../globals";
 import actions from "../../../actions";
 import AddGeneToGenesetDialogue from "./addGeneToGenesetDialogue";
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 type State = any;
 
 // @ts-expect-error ts-migrate(1238) FIXME: Unable to resolve signature of class decorator whe... Remove this comment to see the full error message
 @connect((state) => {
   return {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     genesetsUI: (state as any).genesetsUI,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     colorAccessor: (state as any).colors.colorAccessor,
   };
 })
+// eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
 class GenesetMenus extends React.PureComponent<{}, State> {
+  // eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
   constructor(props: {}) {
     super(props);
     this.state = {};
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   activateAddGeneToGenesetMode = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, geneset } = this.props;
@@ -41,6 +47,7 @@ class GenesetMenus extends React.PureComponent<{}, State> {
     });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   activateEditGenesetNameMode = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, geneset } = this.props;
@@ -51,6 +58,7 @@ class GenesetMenus extends React.PureComponent<{}, State> {
     });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleColorByEntireGeneset = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, geneset } = this.props;
@@ -61,12 +69,14 @@ class GenesetMenus extends React.PureComponent<{}, State> {
     });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleDeleteGeneset = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, geneset } = this.props;
     dispatch(actions.genesetDelete(geneset));
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'geneset' does not exist on type 'Readonl... Remove this comment to see the full error message
     const { geneset, genesetsEditable, createText, colorAccessor } = this.props;

client/src/components/geneExpression/quickGene.tsx

@@ -10,6 +10,7 @@ import Gene from "./gene";
 import { postUserErrorToast } from "../framework/toasters";
 import actions from "../../actions";
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 const usePrevious = (value: any) => {
   const ref = useRef();
   useEffect(() => {
@@ -18,6 +19,7 @@ const usePrevious = (value: any) => {
   return ref.current;
 };
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
 function QuickGene() {
   const dispatch = useDispatch();
 
@@ -28,8 +30,11 @@ function QuickGene() {
   const { annoMatrix, userDefinedGenes, userDefinedGenesLoading } = useSelector(
     (state) => {
       return {
+        // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
         annoMatrix: (state as any).annoMatrix,
+        // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
         userDefinedGenes: (state as any).controls.userDefinedGenes,
+        // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
         userDefinedGenesLoading: (state as any).controls
           .userDefinedGenesLoading,
       };
@@ -41,6 +46,7 @@ function QuickGene() {
   // @ts-expect-error ts-migrate(2345) FIXME: Argument of type '() => Promise<void>' is not assi... Remove this comment to see the full error message
   useEffect(async () => {
     if (!annoMatrix) return;
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     if (annoMatrix !== (prevProps as any)?.annoMatrix) {
       const { schema } = annoMatrix;
       const varIndex = schema.annotations.var.index;
@@ -60,7 +66,9 @@ function QuickGene() {
   const handleExpand = () => setIsExpanded(!isExpanded);
 
   const renderGene = (
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     fuzzySortResult: any,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     { handleClick, modifiers }: any
   ) => {
     if (!modifiers.matchesPredicate) {
@@ -75,6 +83,7 @@ function QuickGene() {
         disabled={modifiers.disabled}
         data-testid={`suggest-menu-item-${geneName}`}
         key={geneName}
+        // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
         onClick={(g: any /* this fires when user clicks a menu item */) =>
           handleClick(g)
         }
@@ -83,6 +92,7 @@ function QuickGene() {
     );
   };
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   const handleClick = (g: any) => {
     if (!g) return;
     const gene = g.target;
@@ -98,6 +108,7 @@ function QuickGene() {
     }
   };
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   const filterGenes = (query: any, genes: any) =>
     /* fires on load, once, and then for each character typed into the input */
     fuzzysort.go(query, genes, {
@@ -105,11 +116,13 @@ function QuickGene() {
       threshold: -10000, // don't return bad results
     });
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   const removeGene = (gene: any) => () => {
     dispatch({ type: "clear user defined gene", data: gene });
   };
 
   const QuickGenes = useMemo(() => {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     return userDefinedGenes.map((gene: any) => {
       return (
         <Gene

client/src/components/graph/drawPointsRegl.ts

@@ -1,5 +1,6 @@
 import { glPointFlags, glPointSize } from "../../util/glHelpers";
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export default function drawPointsRegl(regl: any) {
   return regl({
     vert: `

client/src/components/graph/graph.tsx

@@ -34,6 +34,7 @@ Simple 2D transforms control all point painting.  There are three:
   * camera - apply a 2D camera transformation (pan, zoom)
   * projection - apply any transformation required for screen size and layout
 */
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function createProjectionTF(viewportWidth: any, viewportHeight: any) {
   /*
   the projection transform accounts for the screen size & other layout
@@ -68,21 +69,33 @@ function createModelTF() {
   return m;
 }
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 type GraphState = any;
 
 // @ts-expect-error ts-migrate(1238) FIXME: Unable to resolve signature of class decorator whe... Remove this comment to see the full error message
 @connect((state) => ({
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   annoMatrix: (state as any).annoMatrix,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   crossfilter: (state as any).obsCrossfilter,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   selectionTool: (state as any).graphSelection.tool,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   currentSelection: (state as any).graphSelection.selection,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   layoutChoice: (state as any).layoutChoice,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   graphInteractionMode: (state as any).controls.graphInteractionMode,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   colors: (state as any).colors,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   pointDilation: (state as any).pointDilation,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   genesets: (state as any).genesets.genesets,
 }))
+// eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
 class Graph extends React.Component<{}, GraphState> {
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   static createReglState(canvas: any) {
     /*
         Must be created for each canvas
@@ -108,12 +121,15 @@ class Graph extends React.Component<{}, GraphState> {
     };
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   static watchAsync(props: any, prevProps: any) {
     return !shallowEqual(props.watchProps, prevProps.watchProps);
   }
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   cachedAsyncProps: any;
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   reglCanvas: any;
 
   computePointPositions = memoize((X, Y, modelTF) => {
@@ -214,6 +230,7 @@ class Graph extends React.Component<{}, GraphState> {
     }
   );
 
+  // eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
   constructor(props: {}) {
     super(props);
     const viewport = this.getViewportDimensions();
@@ -255,10 +272,12 @@ class Graph extends React.Component<{}, GraphState> {
     };
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   componentDidMount() {
     window.addEventListener("resize", this.handleResize);
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
   componentDidUpdate(prevProps: {}, prevState: GraphState) {
     const {
       // @ts-expect-error ts-migrate(2339) FIXME: Property 'selectionTool' does not exist on type 'R... Remove this comment to see the full error message
@@ -312,10 +331,12 @@ class Graph extends React.Component<{}, GraphState> {
     }
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   componentWillUnmount() {
     window.removeEventListener("resize", this.handleResize);
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleResize = () => {
     const { state } = this.state;
     const viewport = this.getViewportDimensions();
@@ -327,17 +348,20 @@ class Graph extends React.Component<{}, GraphState> {
     });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleCanvasEvent = (e: any) => {
     const { camera, projectionTF } = this.state;
     if (e.type !== "wheel") e.preventDefault();
     if (camera.handleEvent(e, projectionTF)) {
       this.renderCanvas();
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       this.setState((state: any) => {
         return { ...state, updateOverlay: !state.updateOverlay };
       });
     }
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleBrushDragAction() {
     /*
           event describing brush position:
@@ -369,6 +393,7 @@ class Graph extends React.Component<{}, GraphState> {
     );
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleBrushStartAction() {
     // Ignore programatically generated events.
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'event' does not exist on type 'typeof im... Remove this comment to see the full error message
@@ -378,6 +403,7 @@ class Graph extends React.Component<{}, GraphState> {
     dispatch(actions.graphBrushStartAction());
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleBrushEndAction() {
     // Ignore programatically generated events.
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'event' does not exist on type 'typeof im... Remove this comment to see the full error message
@@ -410,12 +436,14 @@ class Graph extends React.Component<{}, GraphState> {
     }
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleBrushDeselectAction() {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, layoutChoice } = this.props;
     dispatch(actions.graphBrushDeselectAction(layoutChoice.current));
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleLassoStart() {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, layoutChoice } = this.props;
@@ -424,6 +452,7 @@ class Graph extends React.Component<{}, GraphState> {
   }
 
   // when a lasso is completed, filter to the points within the lasso polygon
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleLassoEnd(polygon: any) {
     const minimumPolygonArea = 10;
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
@@ -438,24 +467,28 @@ class Graph extends React.Component<{}, GraphState> {
       dispatch(
         actions.graphLassoEndAction(
           layoutChoice.current,
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           polygon.map((xy: any) => this.mapScreenToPoint(xy))
         )
       );
     }
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleLassoCancel() {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, layoutChoice } = this.props;
     dispatch(actions.graphLassoCancelAction(layoutChoice.current));
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleLassoDeselectAction() {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, layoutChoice } = this.props;
     dispatch(actions.graphLassoDeselectAction(layoutChoice.current));
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleDeselectAction() {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'selectionTool' does not exist on type 'R... Remove this comment to see the full error message
     const { selectionTool } = this.props;
@@ -463,6 +496,7 @@ class Graph extends React.Component<{}, GraphState> {
     if (selectionTool === "lasso") this.handleLassoDeselectAction();
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleOpacityRangeChange(e: any) {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch } = this.props;
@@ -472,6 +506,7 @@ class Graph extends React.Component<{}, GraphState> {
     });
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   setReglCanvas = (canvas: any) => {
     this.reglCanvas = canvas;
     this.setState({
@@ -479,6 +514,7 @@ class Graph extends React.Component<{}, GraphState> {
     });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   getViewportDimensions = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'viewportRef' does not exist on type 'Rea... Remove this comment to see the full error message
     const { viewportRef } = this.props;
@@ -488,6 +524,7 @@ class Graph extends React.Component<{}, GraphState> {
     };
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   createToolSVG = () => {
     /*
         Called from componentDidUpdate. Create the tool SVG, and return any
@@ -531,6 +568,7 @@ class Graph extends React.Component<{}, GraphState> {
     return { toolSVG: newToolSVG, tool, container };
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   fetchAsyncProps = async (props: any) => {
     const {
       annoMatrix,
@@ -578,10 +616,15 @@ class Graph extends React.Component<{}, GraphState> {
     };
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   async fetchData(
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     annoMatrix: any,
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     layoutChoice: any,
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     colors: any,
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     pointDilation: any
   ) {
     /*
@@ -610,6 +653,7 @@ class Graph extends React.Component<{}, GraphState> {
     return Promise.all(promises);
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   brushToolUpdate(tool: any, container: any) {
     /*
         this is called from componentDidUpdate(), so be very careful using
@@ -653,6 +697,7 @@ class Graph extends React.Component<{}, GraphState> {
     }
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   lassoToolUpdate(tool: any) {
     /*
         this is called from componentDidUpdate(), so be very careful using
@@ -664,6 +709,7 @@ class Graph extends React.Component<{}, GraphState> {
       /*
             if there is a current selection, make sure the lasso tool matches
             */
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       const polygon = currentSelection.polygon.map((p: any) =>
         this.mapPointToScreen(p)
       );
@@ -673,6 +719,7 @@ class Graph extends React.Component<{}, GraphState> {
     }
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   selectionToolUpdate(tool: any, container: any) {
     /*
         this is called from componentDidUpdate(), so be very careful using
@@ -694,6 +741,7 @@ class Graph extends React.Component<{}, GraphState> {
     }
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   mapScreenToPoint(pin: any) {
     /*
         Map an XY coordinates from screen domain to cell/point range,
@@ -712,6 +760,7 @@ class Graph extends React.Component<{}, GraphState> {
     return xy;
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   mapPointToScreen(xyCell: any) {
     /*
         Map an XY coordinate from cell/point domain to screen range.  Inverse
@@ -749,6 +798,7 @@ class Graph extends React.Component<{}, GraphState> {
     );
   });
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   updateReglAndRender(asyncProps: any, prevAsyncProps: any) {
     const { positions, colors, flags, height, width } = asyncProps;
     this.cachedAsyncProps = asyncProps;
@@ -772,6 +822,7 @@ class Graph extends React.Component<{}, GraphState> {
     if (needToRenderCanvas) this.renderCanvas();
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   updateColorTable(colors: any, colorDf: any) {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'annoMatrix' does not exist on type 'Read... Remove this comment to see the full error message
     const { annoMatrix } = this.props;
@@ -796,6 +847,7 @@ class Graph extends React.Component<{}, GraphState> {
     );
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   createColorByQuery(colors: any) {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'annoMatrix' does not exist on type 'Read... Remove this comment to see the full error message
     const { annoMatrix, genesets } = this.props;
@@ -804,13 +856,21 @@ class Graph extends React.Component<{}, GraphState> {
     return createColorQuery(colorMode, colorAccessor, schema, genesets);
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   renderPoints(
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     regl: any,
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     drawPoints: any,
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     colorBuffer: any,
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     pointBuffer: any,
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     flagBuffer: any,
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     camera: any,
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     projectionTF: any
   ) {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'annoMatrix' does not exist on type 'Read... Remove this comment to see the full error message
@@ -838,6 +898,7 @@ class Graph extends React.Component<{}, GraphState> {
     regl._gl.flush();
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     const {
       // @ts-expect-error ts-migrate(2339) FIXME: Property 'graphInteractionMode' does not exist on ... Remove this comment to see the full error message
@@ -957,6 +1018,7 @@ class Graph extends React.Component<{}, GraphState> {
   }
 }
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 const ErrorLoading = ({ displayName, error, width, height }: any) => {
   console.log(error); // log to console as this is an unepected error
   return (
@@ -973,6 +1035,7 @@ const ErrorLoading = ({ displayName, error, width, height }: any) => {
   );
 };
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 const StillLoading = ({ displayName, width, height }: any) => {
   /*
   Render a busy/loading indicator

client/src/components/graph/overlays/centroidLabels.tsx

@@ -8,19 +8,28 @@ import { createColorQuery } from "../../../util/stateManager/colorHelpers";
 
 // @ts-expect-error ts-migrate(1238) FIXME: Unable to resolve signature of class decorator whe... Remove this comment to see the full error message
 @connect((state) => ({
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   annoMatrix: (state as any).annoMatrix,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   colors: (state as any).colors,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   layoutChoice: (state as any).layoutChoice,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   dilatedValue: (state as any).pointDilation.categoryField,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   categoricalSelection: (state as any).categoricalSelection,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   showLabels: (state as any).centroidLabels?.showLabels,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   genesets: (state as any).genesets.genesets,
 }))
 export default class CentroidLabels extends PureComponent {
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   static watchAsync(props: any, prevProps: any) {
     return !shallowEqual(props.watchProps, prevProps.watchProps);
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   fetchAsyncProps = async (props: any) => {
     const {
       annoMatrix,
@@ -55,6 +64,7 @@ export default class CentroidLabels extends PureComponent {
   };
 
   // @ts-expect-error ts-migrate(6133) FIXME: 'e' is declared but its value is never read.
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleMouseEnter = (e: any, colorAccessor: any, label: any) => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch } = this.props;
@@ -66,6 +76,7 @@ export default class CentroidLabels extends PureComponent {
   };
 
   // @ts-expect-error ts-migrate(6133) FIXME: 'e' is declared but its value is never read.
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleMouseOut = (e: any, colorAccessor: any, label: any) => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch } = this.props;
@@ -76,6 +87,7 @@ export default class CentroidLabels extends PureComponent {
     });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   colorByQuery() {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'annoMatrix' does not exist on type 'Read... Remove this comment to see the full error message
     const { annoMatrix, colors, genesets } = this.props;
@@ -84,6 +96,7 @@ export default class CentroidLabels extends PureComponent {
     return createColorQuery(colorMode, colorAccessor, schema, genesets);
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   async fetchData() {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'annoMatrix' does not exist on type 'Read... Remove this comment to see the full error message
     const { annoMatrix, layoutChoice } = this.props;
@@ -101,6 +114,7 @@ export default class CentroidLabels extends PureComponent {
     return Promise.all(promises);
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     const {
       // @ts-expect-error ts-migrate(2339) FIXME: Property 'inverseTransform' does not exist on type... Remove this comment to see the full error message
@@ -134,10 +148,12 @@ export default class CentroidLabels extends PureComponent {
         <Async.Fulfilled>
           {(asyncProps) => {
             if (!showLabels) return null;
+            // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
             const labelSVGS: any = [];
             const deselectOpacity = 0.375;
             // @ts-expect-error ts-migrate(2339) FIXME: Property 'category' does not exist on type 'unknow... Remove this comment to see the full error message
             const { category, colorAccessor, labels } = asyncProps;
+            // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
             labels.forEach((coords: any, label: any) => {
               const selected = category.get(label) ?? true;
               // Mirror LSB middle truncation
@@ -181,7 +197,7 @@ const Label = ({
   colorAccessor,
   displayLabel,
   onMouseEnter,
-  onMouseOut,
+  onMouseOut, // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 }: any) => {
   /*
   Render a label at a given coordinate.

client/src/components/graph/overlays/graphOverlayLayer.tsx

@@ -3,8 +3,10 @@ import React, { PureComponent, cloneElement } from "react";
 // @ts-expect-error ts-migrate(2307) FIXME: Cannot find module '../graph.css' or its correspon... Remove this comment to see the full error message
 import styles from "../graph.css";
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 type State = any;
 
+// eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
 export default class GraphOverlayLayer extends PureComponent<{}, State> {
   /*
     This component takes its children (assumed in the data coordinate space ([0, 1] range, origin in bottom left corner))
@@ -12,6 +14,7 @@ export default class GraphOverlayLayer extends PureComponent<{}, State> {
 
     Children are assigned in the graph component and must implement onDisplayChange()
    */
+  // eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
   constructor(props: {}) {
     super(props);
     this.state = {
@@ -19,6 +22,7 @@ export default class GraphOverlayLayer extends PureComponent<{}, State> {
     };
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   matrixToTransformString = (m: any) => {
     /* 
       Translates the gl-matrix mat3 to SVG matrix transform style
@@ -31,17 +35,21 @@ export default class GraphOverlayLayer extends PureComponent<{}, State> {
     return `matrix(${m[0]} ${m[1]} ${m[3]} ${m[4]} ${m[6]} ${m[7]})`;
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   reverseMatrixScaleTransformString = (m: any) => {
     return `matrix(${1 / m[0]} 0 0 ${1 / m[4]} 0 0)`;
   };
 
   // This is passed to all children, should be called when an overlay's display state is toggled along with the overlay name and its new display state in boolean form
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   overlaySetShowing = (overlay: any, displaying: any) => {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     this.setState((state: any) => {
       return { ...state, display: { ...state.display, [overlay]: displaying } };
     });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     const {
       // @ts-expect-error ts-migrate(2339) FIXME: Property 'cameraTF' does not exist on type 'Readon... Remove this comment to see the full error message

client/src/components/graph/setupLasso.ts

@@ -1,18 +1,27 @@
 import * as d3 from "d3";
 import { Colors } from "@blueprintjs/core";
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
 const Lasso = () => {
   const dispatch = d3.dispatch("start", "end", "cancel");
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   const lasso = (svg: any) => {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     let lassoPolygon: any;
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     let lassoPath: any;
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     let closePath: any;
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     let lassoInProgress: any;
 
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     const polygonToPath = (polygon: any) =>
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       `M${polygon.map((d: any) => d.join(",")).join("L")}`;
 
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     const distance = (pt1: any, pt2: any) =>
       Math.sqrt((pt2[0] - pt1[0]) ** 2 + (pt2[1] - pt1[1]) ** 2);
 
@@ -21,6 +30,7 @@ const Lasso = () => {
     const lassoPathColor = Colors.BLUE5;
 
     const handleDragStart = () => {
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       lassoPolygon = [(d3 as any).mouse(svg.node())]; // current x y of mouse within element
 
       if (lassoPath) {
@@ -56,6 +66,7 @@ const Lasso = () => {
     };
 
     const handleDrag = () => {
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       const point = (d3 as any).mouse(svg.node());
       lassoPolygon.push(point);
       lassoPath.attr("d", polygonToPath(lassoPolygon));
@@ -126,6 +137,7 @@ const Lasso = () => {
 
     area.call(drag);
 
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     (lasso as any).reset = () => {
       if (lassoPath) {
         lassoPath.remove();
@@ -138,6 +150,7 @@ const Lasso = () => {
       }
     };
 
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     (lasso as any).move = (polygon: any) => {
       if (polygon !== lassoPolygon || polygon.length !== lassoPolygon.length) {
         // @ts-expect-error ts-migrate(2339) FIXME: Property 'reset' does not exist on type '(svg: any... Remove this comment to see the full error message
@@ -155,6 +168,7 @@ const Lasso = () => {
     };
   };
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   lasso.on = (type: any, callback: any) => {
     dispatch.on(type, callback);
     return lasso;

client/src/components/graph/setupSVGandBrush.ts

@@ -7,12 +7,19 @@ import Lasso from "./setupLasso";
 *******************************************
 ******************************************/
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
 export default (
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   selectionToolType: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleStartAction: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleDragAction: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleEndAction: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleCancelAction: any,
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   viewport: any
 ) => {
   const svg = d3.select("#graph-wrapper").select("#lasso-layer");
@@ -39,6 +46,7 @@ export default (
   }
 
   if (selectionToolType === "lasso") {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     const lasso = (Lasso() as any)
       .on("end", handleEndAction)
       // FYI, Lasso doesn't generate drag

client/src/components/infoDrawer/infoDrawer.tsx

@@ -8,14 +8,20 @@ import { selectableCategoryNames } from "../../util/stateManager/controlsHelpers
 // @ts-expect-error ts-migrate(1238) FIXME: Unable to resolve signature of class decorator whe... Remove this comment to see the full error message
 @connect((state) => {
   return {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     schema: (state as any).annoMatrix.schema,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     datasetTitle: (state as any).config?.displayNames?.dataset ?? "",
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     aboutURL: (state as any).config?.links?.["about-dataset"],
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     isOpen: (state as any).controls.datasetDrawer,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     dataPortalProps: (state as any).config?.corpora_props,
   };
 })
 class InfoDrawer extends PureComponent {
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleClose = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch } = this.props;
@@ -23,6 +29,7 @@ class InfoDrawer extends PureComponent {
     dispatch({ type: "toggle dataset drawer" });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     const {
       // @ts-expect-error ts-migrate(2339) FIXME: Property 'position' does not exist on type 'Readon... Remove this comment to see the full error message
@@ -43,6 +50,7 @@ class InfoDrawer extends PureComponent {
     const allCategoryNames = selectableCategoryNames(schema).sort();
     const singleValueCategories = new Map();
 
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     allCategoryNames.forEach((catName: any) => {
       const isUserAnno = schema?.annotations?.obsByName[catName]?.writable;
       const colSchema = schema.annotations.obsByName[catName];

client/src/components/infoDrawer/infoFormat.tsx

@@ -1,6 +1,7 @@
 import { H3, H1, UL, HTMLTable, Classes } from "@blueprintjs/core";
 import React from "react";
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 const renderContributors = (contributors: any, affiliations: any) => {
   // eslint-disable-next-line no-constant-condition --  Temp removed contributor section to avoid publishing PII
   if (!contributors || contributors.length === 0 || true) return null;
@@ -8,6 +9,7 @@ const renderContributors = (contributors: any, affiliations: any) => {
     <>
       <H3>Contributors</H3>
       <p>
+        {/* eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS. */}
         {contributors.map((contributor: any) => {
           const { email, name, institution } = contributor;
 
@@ -27,6 +29,7 @@ const renderContributors = (contributors: any, affiliations: any) => {
 
 // generates a list of unique institutions by order of appearance in contributors
 const buildAffiliations = (contributors = []) => {
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   const affiliations: any = [];
   contributors.forEach((contributor) => {
     const { institution } = contributor;
@@ -37,12 +40,14 @@ const buildAffiliations = (contributors = []) => {
   return affiliations;
 };
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 const renderAffiliations = (affiliations: any) => {
   if (affiliations.length === 0) return null;
   return (
     <>
       <H3>Affiliations</H3>
       <UL>
+        {/* eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS. */}
         {affiliations.map((item: any, index: any) => (
           <div key={item}>
             <sup>{index + 1}</sup>
@@ -55,6 +60,7 @@ const renderAffiliations = (affiliations: any) => {
   );
 };
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 const renderDOILink = (type: any, doi: any) => {
   if (!doi) return null;
   return (
@@ -72,7 +78,9 @@ const renderDOILink = (type: any, doi: any) => {
 const ONTOLOGY_KEY = "ontology_term_id";
 // Render list of metadata attributes found in categorical field
 const renderDatasetMetadata = (
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   singleValueCategories: any,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   corporaMetadata: any
 ) => {
   if (singleValueCategories.size === 0) return null;
@@ -110,15 +118,18 @@ const renderDatasetMetadata = (
 
             // If this category is a ontology term, let's add its value to the previous node
             if (String(category).includes(ONTOLOGY_KEY)) {
+              // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
               const prevElem = (elems as any).pop();
               const newChildren = [...prevElem.props.children];
               newChildren.splice(2, 1, [<td key="ontology">{value}</td>]);
               // Props aren't extensible so we must clone and alter the component to append the new child
+              // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
               (elems as any).push(
                 React.cloneElement(prevElem, prevElem.props, newChildren)
               );
             } else {
               // Create the list item
+              // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
               (elems as any).push(
                 <tr key={category}>
                   <td>{`${category}:`}</td>
@@ -137,6 +148,7 @@ const renderDatasetMetadata = (
 
 // Renders any links found in the config where link_type is not "SUMMARY"
 // If there are no links in the config, render the aboutURL
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 const renderLinks = (projectLinks: any, aboutURL: any) => {
   if (!projectLinks && !aboutURL) return null;
   if (projectLinks)
@@ -144,6 +156,7 @@ const renderLinks = (projectLinks: any, aboutURL: any) => {
       <>
         <H3>Project Links</H3>
         <UL>
+          {/* eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS. */}
           {projectLinks.map((link: any) => {
             if (link.link_type === "SUMMARY") return null;
             return (

client/src/components/labelInput.tsx

@@ -3,8 +3,10 @@ import { InputGroup, MenuItem, Keys } from "@blueprintjs/core";
 import { Suggest } from "@blueprintjs/select";
 import fuzzysort from "fuzzysort";
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 type State = any;
 
+// eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
 export default class LabelInput extends React.PureComponent<{}, State> {
   /*
   Input widget for text labels, which acts like an InputGroup, but will also 
@@ -28,6 +30,7 @@ export default class LabelInput extends React.PureComponent<{}, State> {
   /* maxinum number of suggestions */
   static QueryResultLimit = 100;
 
+  // eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
   constructor(props: {}) {
     super(props);
 
@@ -41,6 +44,7 @@ export default class LabelInput extends React.PureComponent<{}, State> {
     };
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleQueryChange = (query: any, event: any) => {
     // https://github.com/palantir/blueprint/issues/2983
     if (!event) return;
@@ -56,6 +60,7 @@ export default class LabelInput extends React.PureComponent<{}, State> {
     if (onChange) onChange(query, event);
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleItemSelect = (item: any, event: any) => {
     /* only report the select if not already reported via onChange() */
     const { target } = item;
@@ -65,6 +70,7 @@ export default class LabelInput extends React.PureComponent<{}, State> {
     if (target !== query && onSelect) onSelect(target, event);
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleKeyDown = (e: any) => {
     /* 
     prevent these events from propagating to containing form/dialog
@@ -80,14 +86,18 @@ export default class LabelInput extends React.PureComponent<{}, State> {
     }
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleChange = (e: any) => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'onChange' does not exist on type 'Readon... Remove this comment to see the full error message
     const { onChange } = this.props;
     if (onChange) onChange(e.target.value);
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   renderLabelSuggestion = (
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     queryResult: any,
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     { handleClick, modifiers }: any
   ) => {
     if (queryResult.newLabel) {
@@ -116,6 +126,7 @@ export default class LabelInput extends React.PureComponent<{}, State> {
     );
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   filterLabels(query: any) {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'labelSuggestions' does not exist on type... Remove this comment to see the full error message
     const { labelSuggestions } = this.props;
@@ -123,12 +134,15 @@ export default class LabelInput extends React.PureComponent<{}, State> {
 
     /* empty query is wildcard */
     if (query === "") {
-      return labelSuggestions
+      return (
-        .slice(0, LabelInput.QueryResultLimit)
+        labelSuggestions
-        .map((l: any) => ({
+          .slice(0, LabelInput.QueryResultLimit)
-          target: l,
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
-          score: -10000,
+          .map((l: any) => ({
-        }));
+            target: l,
+            score: -10000,
+          }))
+      );
     }
 
     /* else, do a fuzzy query */
@@ -145,6 +159,7 @@ export default class LabelInput extends React.PureComponent<{}, State> {
     return queryResults;
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     const { props } = this;
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'labelSuggestions' does not exist on type... Remove this comment to see the full error message
@@ -155,6 +170,7 @@ export default class LabelInput extends React.PureComponent<{}, State> {
       return (
         <InputGroup
           autoFocus={autoFocus}
+          // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
           {...(props as any).inputProps} // eslint-disable-line react/jsx-props-no-spreading --- Allows for modularity
           value={label}
           onChange={this.handleChange}
@@ -164,9 +180,11 @@ export default class LabelInput extends React.PureComponent<{}, State> {
 
     const popoverProps = {
       minimal: true,
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       ...(props as any).popoverProps,
     };
     const inputProps = {
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       ...(props as any).inputProps,
       autoFocus: false,
     };

client/src/components/leftSidebar/index.tsx

@@ -8,10 +8,13 @@ import Continuous from "../continuous/continuous";
 
 // @ts-expect-error ts-migrate(1238) FIXME: Unable to resolve signature of class decorator whe... Remove this comment to see the full error message
 @connect((state) => ({
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   scatterplotXXaccessor: (state as any).controls.scatterplotXXaccessor,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   scatterplotYYaccessor: (state as any).controls.scatterplotYYaccessor,
 }))
 class LeftSideBar extends React.Component {
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'scatterplotXXaccessor' does not exist on... Remove this comment to see the full error message
     const { scatterplotXXaccessor, scatterplotYYaccessor } = this.props;

client/src/components/leftSidebar/topLeftLogoAndTitle.tsx

@@ -12,26 +12,34 @@ const DATASET_TITLE_FONT_SIZE = 14;
 
 // @ts-expect-error ts-migrate(1238) FIXME: Unable to resolve signature of class decorator whe... Remove this comment to see the full error message
 @connect((state) => {
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   const { corpora_props: corporaProps } = (state as any).config;
   const correctVersion =
     ["1.0.0", "1.1.0"].indexOf(corporaProps?.version?.corpora_schema_version) >
     -1;
   return {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     datasetTitle: (state as any).config?.displayNames?.dataset ?? "",
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     libraryVersions: (state as any).config?.library_versions,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     aboutLink: (state as any).config?.links?.["about-dataset"],
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     tosURL: (state as any).config?.parameters?.about_legal_tos,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     privacyURL: (state as any).config?.parameters?.about_legal_privacy,
     title: correctVersion ? corporaProps?.title : undefined,
   };
 })
 class LeftSideBar extends React.Component {
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleClick = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch } = this.props;
     dispatch({ type: "toggle dataset drawer" });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     const {
       // @ts-expect-error ts-migrate(2339) FIXME: Property 'datasetTitle' does not exist on type 'Re... Remove this comment to see the full error message

client/src/components/menubar/authButtons.tsx

@@ -37,6 +37,7 @@ const Auth = React.memo((props) => {
 
   const isAuthenticated = userInfo && userInfo.is_authenticated;
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   (window as any).userInfo = userInfo;
 
   const randomInt = Math.random() * 15;
@@ -131,6 +132,7 @@ const Auth = React.memo((props) => {
   }
 });
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function PromptContent({ setIsPromptOpen }: any) {
   const [isChecked, setIsChecked] = useState(false);
 

client/src/components/menubar/cellSetButtons.tsx

@@ -6,15 +6,18 @@ import actions from "../../actions";
 
 // @ts-expect-error ts-migrate(1238) FIXME: Unable to resolve signature of class decorator whe... Remove this comment to see the full error message
 @connect((state) => ({
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   differential: (state as any).differential,
 }))
 class CellSetButton extends React.PureComponent {
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   set() {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, eitherCellSetOneOrTwo } = this.props;
     dispatch(actions.setCellSetFromSelection(eitherCellSetOneOrTwo));
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'differential' does not exist on type 'Re... Remove this comment to see the full error message
     const { differential, eitherCellSetOneOrTwo } = this.props;

client/src/components/menubar/clip.tsx

@@ -45,7 +45,8 @@ const Clip = React.memo((props) => {
     pendingClipPercentiles?.clipPercentileMax ?? clipPercentileMax;
   const intent =
     clipPercentileMin > 0 || clipPercentileMax < 100
-      ? (Intent as any).INTENT_WARNING
+      ? // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
+        (Intent as any).INTENT_WARNING
       : Intent.NONE;
 
   return (

client/src/components/menubar/diffexpButtons.tsx

@@ -9,12 +9,16 @@ import CellSetButton from "./cellSetButtons";
 
 // @ts-expect-error ts-migrate(1238) FIXME: Unable to resolve signature of class decorator whe... Remove this comment to see the full error message
 @connect((state) => ({
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   differential: (state as any).differential,
   diffexpMayBeSlow:
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     (state as any).config?.parameters?.["diffexp-may-be-slow"] ?? false,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   diffexpCellcountMax: (state as any).config?.limits?.diffexp_cellcount_max,
 }))
 class DiffexpButtons extends React.PureComponent {
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   computeDiffExp = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, differential } = this.props;
@@ -28,6 +32,7 @@ class DiffexpButtons extends React.PureComponent {
     }
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     /* diffexp-related buttons may be disabled */
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'differential' does not exist on type 'Re... Remove this comment to see the full error message

client/src/components/menubar/index.tsx

@@ -14,12 +14,14 @@ import UndoRedoReset from "./undoRedo";
 import DiffexpButtons from "./diffexpButtons";
 import { getEmbSubsetView } from "../../util/stateManager/viewStackHelpers";
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 type State = any;
 
 // @ts-expect-error ts-migrate(1238) FIXME: Unable to resolve signature of class decorator whe... Remove this comment to see the full error message
 @connect((state) => {
   // @ts-expect-error ts-migrate(2339) FIXME: Property 'annoMatrix' does not exist on type 'Defa... Remove this comment to see the full error message
   const { annoMatrix } = state;
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   const crossfilter = (state as any).obsCrossfilter;
   const selectedCount = crossfilter.countSelected();
 
@@ -33,32 +35,49 @@ type State = any;
   return {
     subsetPossible,
     subsetResetPossible,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     graphInteractionMode: (state as any).controls.graphInteractionMode,
     clipPercentileMin: Math.round(100 * (annoMatrix?.clipRange?.[0] ?? 0)),
     clipPercentileMax: Math.round(100 * (annoMatrix?.clipRange?.[1] ?? 1)),
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     userDefinedGenes: (state as any).controls.userDefinedGenes,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     colorAccessor: (state as any).colors.colorAccessor,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     scatterplotXXaccessor: (state as any).controls.scatterplotXXaccessor,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     scatterplotYYaccessor: (state as any).controls.scatterplotYYaccessor,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     libraryVersions: (state as any).config?.library_versions,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     auth: (state as any).config?.authentication,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     userInfo: (state as any).userInfo,
     // @ts-expect-error ts-migrate(7053) FIXME: Element implicitly has an 'any' type because expre... Remove this comment to see the full error message
     undoDisabled: state["@@undoable/past"].length === 0,
     // @ts-expect-error ts-migrate(7053) FIXME: Element implicitly has an 'any' type because expre... Remove this comment to see the full error message
     redoDisabled: state["@@undoable/future"].length === 0,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     aboutLink: (state as any).config?.links?.["about-dataset"],
     disableDiffexp:
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (state as any).config?.parameters?.["disable-diffexp"] ?? false,
     diffexpMayBeSlow:
+      // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
       (state as any).config?.parameters?.["diffexp-may-be-slow"] ?? false,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     showCentroidLabels: (state as any).centroidLabels.showLabels,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     tosURL: (state as any).config?.parameters?.about_legal_tos,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     privacyURL: (state as any).config?.parameters?.about_legal_privacy,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     categoricalSelection: (state as any).categoricalSelection,
   };
 })
+// eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
 class MenuBar extends React.PureComponent<{}, State> {
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   static isValidDigitKeyEvent(e: any) {
     /*
     Return true if this event is necessary to enter a percent number input.
@@ -83,6 +102,7 @@ class MenuBar extends React.PureComponent<{}, State> {
     return key >= 0 && key <= 9;
   }
 
+  // eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
   constructor(props: {}) {
     super(props);
     this.state = {
@@ -90,6 +110,7 @@ class MenuBar extends React.PureComponent<{}, State> {
     };
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   isClipDisabled = () => {
     /*
     return true if clip button should be disabled.
@@ -114,6 +135,7 @@ class MenuBar extends React.PureComponent<{}, State> {
     return isDisabled;
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleClipOnKeyPress = (e: any) => {
     /*
     allow only numbers, plus other critical keys which
@@ -124,6 +146,7 @@ class MenuBar extends React.PureComponent<{}, State> {
     }
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleClipPercentileMinValueChange = (v: any) => {
     /*
     Ignore anything that isn't a legit number
@@ -144,6 +167,7 @@ class MenuBar extends React.PureComponent<{}, State> {
     });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   handleClipPercentileMaxValueChange = (v: any) => {
     /*
     Ignore anything that isn't a legit number
@@ -165,6 +189,7 @@ class MenuBar extends React.PureComponent<{}, State> {
     });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleClipCommit = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch } = this.props;
@@ -175,6 +200,7 @@ class MenuBar extends React.PureComponent<{}, State> {
     dispatch(actions.clipAction(min, max));
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleClipOpening = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'clipPercentileMin' does not exist on typ... Remove this comment to see the full error message
     const { clipPercentileMin, clipPercentileMax } = this.props;
@@ -183,10 +209,12 @@ class MenuBar extends React.PureComponent<{}, State> {
     });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleClipClosing = () => {
     this.setState({ pendingClipPercentiles: null });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleCentroidChange = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch, showCentroidLabels } = this.props;
@@ -197,18 +225,21 @@ class MenuBar extends React.PureComponent<{}, State> {
     });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleSubset = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch } = this.props;
     dispatch(actions.subsetAction());
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleSubsetReset = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
     const { dispatch } = this.props;
     dispatch(actions.resetSubsetAction());
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     const {
       // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message

client/src/components/miniHistogram/index.tsx

@@ -7,13 +7,16 @@ import {
 } from "@blueprintjs/core";
 
 export default class MiniHistogram extends React.PureComponent {
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   canvasRef: any;
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   constructor(props: any) {
     super(props);
     this.canvasRef = React.createRef();
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   drawHistogram = () => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'xScale' does not exist on type 'Readonly... Remove this comment to see the full error message
     const { xScale, yScale, bins, width, height } = this.props;
@@ -38,10 +41,12 @@ export default class MiniHistogram extends React.PureComponent {
     }
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   componentDidMount = () => {
     this.drawHistogram();
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   componentDidUpdate = (prevProps: any) => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'obsOrVarContinuousFieldDisplayName' does... Remove this comment to see the full error message
     const { obsOrVarContinuousFieldDisplayName, bins } = this.props;
@@ -53,6 +58,7 @@ export default class MiniHistogram extends React.PureComponent {
       this.drawHistogram();
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     const {
       // @ts-expect-error ts-migrate(2339) FIXME: Property 'domainLabel' does not exist on type 'Rea... Remove this comment to see the full error message

client/src/components/miniStackedBar/index.tsx

@@ -1,13 +1,16 @@
 import React from "react";
 
 export default class MiniStackedBar extends React.PureComponent {
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   canvasRef: any;
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   constructor(props: any) {
     super(props);
     this.canvasRef = React.createRef();
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   drawStacks = () => {
     const {
       // @ts-expect-error ts-migrate(2339) FIXME: Property 'domainValues' does not exist on type 'Re... Remove this comment to see the full error message
@@ -51,16 +54,19 @@ export default class MiniStackedBar extends React.PureComponent {
     }
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   componentDidUpdate = (prevProps: any) => {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'occupancy' does not exist on type 'Reado... Remove this comment to see the full error message
     const { occupancy } = this.props;
     if (occupancy !== prevProps.occupancy) this.drawStacks();
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   componentDidMount = () => {
     this.drawStacks();
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'width' does not exist on type 'Readonly<... Remove this comment to see the full error message
     const { width, height } = this.props;

client/src/components/rightSidebar/index.tsx

@@ -5,10 +5,13 @@ import * as globals from "../../globals";
 
 // @ts-expect-error ts-migrate(1238) FIXME: Unable to resolve signature of class decorator whe... Remove this comment to see the full error message
 @connect((state) => ({
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   scatterplotXXaccessor: (state as any).controls.scatterplotXXaccessor,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   scatterplotYYaccessor: (state as any).controls.scatterplotYYaccessor,
 }))
 class RightSidebar extends React.Component {
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     return (
       <div

client/src/components/scatterplot/drawPointsRegl.ts

@@ -1,5 +1,6 @@
 import { glPointFlags, glPointSize } from "../../util/glHelpers";
 
+// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
 export default function drawPointsRegl(regl: any) {
   return regl({
     vert: `

client/src/components/scatterplot/scatterplot.tsx

@@ -23,6 +23,7 @@ import {
   flagHighlight,
 } from "../../util/glHelpers";
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function createProjectionTF(viewportWidth: any, viewportHeight: any) {
   /*
   the projection transform accounts for the screen size & other layout
@@ -31,6 +32,7 @@ function createProjectionTF(viewportWidth: any, viewportHeight: any) {
   return mat3.projection(m, viewportWidth, viewportHeight);
 }
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function getScale(col: any, rangeMin: any, rangeMax: any) {
   if (!col) return null;
   const { min, max } = col.summarize();
@@ -39,6 +41,7 @@ function getScale(col: any, rangeMin: any, rangeMax: any) {
 const getXScale = memoize(getScale);
 const getYScale = memoize(getScale);
 
+// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 type State = any;
 
 // @ts-expect-error ts-migrate(1238) FIXME: Unable to resolve signature of class decorator whe... Remove this comment to see the full error message
@@ -48,20 +51,27 @@ type State = any;
   const {
     scatterplotXXaccessor,
     scatterplotYYaccessor,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   } = (state as any).controls;
 
   return {
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     annoMatrix: (state as any).annoMatrix,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     colors: (state as any).colors,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     pointDilation: (state as any).pointDilation,
     // Accessors are var/gene names (strings)
     scatterplotXXaccessor,
     scatterplotYYaccessor,
     crossfilter,
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
     genesets: (state as any).genesets.genesets,
   };
 })
+// eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
 class Scatterplot extends React.PureComponent<{}, State> {
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   static createReglState(canvas: any) {
     /*
     Must be created for each canvas
@@ -92,14 +102,18 @@ class Scatterplot extends React.PureComponent<{}, State> {
     };
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   static watchAsync(props: any, prevProps: any) {
     return !shallowEqual(props.watchProps, prevProps.watchProps);
   }
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   axes: any;
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   reglCanvas: any;
 
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
   renderCache: any;
 
   computePointPositions = memoize((X, Y, xScale, yScale) => {
@@ -198,6 +212,7 @@ class Scatterplot extends React.PureComponent<{}, State> {
     }
   );
 
+  // eslint-disable-next-line @typescript-eslint/ban-types --- FIXME: disabled temporarily on migrate to TS.
   constructor(props: {}) {
     super(props);
     const viewport = this.getViewportDimensions();
@@ -213,15 +228,18 @@ class Scatterplot extends React.PureComponent<{}, State> {
     };
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   componentDidMount() {
     // this affect point render size for the scatterplot
     window.addEventListener("resize", this.handleResize);
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   componentWillUnmount() {
     window.removeEventListener("resize", this.handleResize);
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   setReglCanvas = (canvas: any) => {
     this.reglCanvas = canvas;
     if (canvas) {
@@ -232,6 +250,7 @@ class Scatterplot extends React.PureComponent<{}, State> {
     }
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   getViewportDimensions = () => {
     return {
       height: window.innerHeight,
@@ -239,6 +258,7 @@ class Scatterplot extends React.PureComponent<{}, State> {
     };
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   handleResize = () => {
     const { state } = this.state;
     const viewport = this.getViewportDimensions();
@@ -248,6 +268,7 @@ class Scatterplot extends React.PureComponent<{}, State> {
     });
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   fetchAsyncProps = async (props: any) => {
     const {
       scatterplotXXaccessor,
@@ -310,6 +331,7 @@ class Scatterplot extends React.PureComponent<{}, State> {
     };
   };
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   createXQuery(geneName: any) {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'annoMatrix' does not exist on type 'Read... Remove this comment to see the full error message
     const { annoMatrix } = this.props;
@@ -328,6 +350,7 @@ class Scatterplot extends React.PureComponent<{}, State> {
     ];
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   createColorByQuery(colors: any) {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'annoMatrix' does not exist on type 'Read... Remove this comment to see the full error message
     const { annoMatrix, genesets } = this.props;
@@ -336,6 +359,7 @@ class Scatterplot extends React.PureComponent<{}, State> {
     return createColorQuery(colorMode, colorAccessor, schema, genesets);
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   updateColorTable(colors: any, colorDf: any) {
     /* update color table state */
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'annoMatrix' does not exist on type 'Read... Remove this comment to see the full error message
@@ -351,10 +375,15 @@ class Scatterplot extends React.PureComponent<{}, State> {
     );
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   async fetchData(
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     scatterplotXXaccessor: any,
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     scatterplotYYaccessor: any,
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     colors: any,
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     pointDilation: any
   ) {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'annoMatrix' does not exist on type 'Read... Remove this comment to see the full error message
@@ -408,6 +437,7 @@ class Scatterplot extends React.PureComponent<{}, State> {
     );
   });
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
   updateReglAndRender(newRenderCache: any) {
     const { positions, colors, flags } = newRenderCache;
     this.renderCache = newRenderCache;
@@ -418,12 +448,19 @@ class Scatterplot extends React.PureComponent<{}, State> {
     this.renderCanvas();
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   renderPoints(
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     regl: any,
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     drawPoints: any,
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     flagBuffer: any,
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     colorBuffer: any,
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     pointBuffer: any,
+    // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     projectionTF: any
   ) {
     // @ts-expect-error ts-migrate(2339) FIXME: Property 'annoMatrix' does not exist on type 'Read... Remove this comment to see the full error message
@@ -452,6 +489,7 @@ class Scatterplot extends React.PureComponent<{}, State> {
     regl._gl.flush();
   }
 
+  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
   render() {
     const {
       // @ts-expect-error ts-migrate(2339) FIXME: Property 'dispatch' does not exist on type 'Readon... Remove this comment to see the full error message
@@ -564,7 +602,9 @@ class Scatterplot extends React.PureComponent<{}, State> {
                     minimized={minimized}
                     scatterplotYYaccessor={scatterplotYYaccessor}
                     scatterplotXXaccessor={scatterplotXXaccessor}
+                    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
                     xScale={(asyncProps as any).xScale}
+                    // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
                     yScale={(asyncProps as any).yScale}
                   />
                 );