mirror of
https://github.com/chanzuckerberg/cellxgene.git
synced 2026-10-02 06:28:11 +08:00
graph brush selection
This commit is contained in:
@@ -20,29 +20,35 @@ const y = d3.scaleLinear()
|
||||
*******************************************
|
||||
******************************************/
|
||||
|
||||
export const setupGraphElements = (data) => {
|
||||
export const setupGraphElements = (
|
||||
handleBrushSelectAction,
|
||||
handleBrushDeselectAction
|
||||
) => {
|
||||
|
||||
var canvas = d3.select("#graphAttachPoint")
|
||||
.append("canvas")
|
||||
.attr("width", width + margin.left + margin.right)
|
||||
.attr("height", height + margin.top + margin.bottom)
|
||||
.attr("class", `${styles.graphCanvas}`);
|
||||
|
||||
var ctx = canvas.node().getContext("2d");
|
||||
|
||||
var svg = d3.select("#graphAttachPoint").append("svg")
|
||||
.attr("width", width + margin.left + margin.right)
|
||||
.attr("height", height + margin.top + margin.bottom)
|
||||
.attr("class", `${styles.graphSVG}`)
|
||||
.append("g")
|
||||
.attr("transform", "translate(" + margin.left + " " + margin.top + ")");
|
||||
// .append("g")
|
||||
// .attr("transform", "translate(" + margin.left + " " + margin.top + ")");
|
||||
|
||||
var chartArea = d3.select("#graphAttachPoint").append("div")
|
||||
.style("left", margin.left + "px")
|
||||
.style("top", margin.top + "px");
|
||||
|
||||
var canvas = chartArea.append("canvas")
|
||||
.attr("width", width)
|
||||
.attr("height", height)
|
||||
.attr("class", `${styles.graphCanvas}`);
|
||||
|
||||
var context = canvas.node().getContext("2d");
|
||||
setupGraphBrush(
|
||||
svg,
|
||||
handleBrushSelectAction,
|
||||
handleBrushDeselectAction
|
||||
);
|
||||
|
||||
return {
|
||||
svg,
|
||||
context
|
||||
ctx
|
||||
}
|
||||
|
||||
}
|
||||
@@ -61,6 +67,7 @@ export const drawGraph = (
|
||||
ranges,
|
||||
metadata,
|
||||
continuousSelection,
|
||||
graphBrushSelection,
|
||||
) => {
|
||||
|
||||
/* clear canvas */
|
||||
@@ -100,9 +107,48 @@ export const drawGraph = (
|
||||
0, /* sAngle */
|
||||
2 * Math.PI /* eAngle */
|
||||
);
|
||||
|
||||
let pointIsInsideBrushBounds;
|
||||
|
||||
if (graphBrushSelection) {
|
||||
|
||||
pointIsInsideBrushBounds = (
|
||||
x(p[1]) >= graphBrushSelection.northwestX &&
|
||||
x(p[1]) <= graphBrushSelection.southeastX &&
|
||||
y(p[2]) >= graphBrushSelection.northwestY &&
|
||||
y(p[2]) <= graphBrushSelection.southeastY
|
||||
);
|
||||
|
||||
// if (i === 5) {
|
||||
// console.log(
|
||||
// pointIsInsideBrushBounds,
|
||||
// x(p[1]),
|
||||
// y(p[2]),
|
||||
// graphBrushSelection,
|
||||
// );
|
||||
// }
|
||||
}
|
||||
|
||||
if (pointIsInsideBrushBounds) {
|
||||
console.log('inside', x(p[1]), y(p[2]), graphBrushSelection)
|
||||
context.fillStyle = "rgb(255,0,0)";
|
||||
} else {
|
||||
context.fillStyle = "rgb(0,0,0)"
|
||||
}
|
||||
|
||||
// if (color) {
|
||||
// if (i === 10) {
|
||||
// console.log(p[0], x(p[1]), y(p[2]), _.find(metadata, {CellName: p[0]}))
|
||||
// }
|
||||
// context.fillStyle = d3.interpolateViridis(colorScale(
|
||||
// _.find(metadata, {CellName: p[0]})[color] /* this.state.cells.metadata["23452345325"]["ERCC_reads"] = 20000 would be much faster as key value lookup */
|
||||
// ));
|
||||
// context.strokeStyle = "red";
|
||||
// }
|
||||
|
||||
context.fill();
|
||||
|
||||
if (i < 20) {
|
||||
// if (i < 20) {
|
||||
// console.log(
|
||||
// '0 to 1 scale', expressionToColorScale(expressionsCountsMap[p[0]]),
|
||||
// 'color', d3.interpolateViridis(expressionToColorScale(
|
||||
@@ -110,14 +156,27 @@ export const drawGraph = (
|
||||
// ))
|
||||
// )
|
||||
// console.log('meta', _.find(metadata, {CellName: p[0]}), color, p)
|
||||
}
|
||||
// }
|
||||
// context.fillStyle = d3.interpolateViridis(expressionToColorScale(
|
||||
// expressionsCountsMap[p[0]]
|
||||
// ));
|
||||
if (color) {
|
||||
context.fillStyle = d3.interpolateViridis(colorScale(
|
||||
_.find(metadata, {CellName: p[0]})[color] /* this.state.cells.metadata["23452345325"]["ERCC_reads"] = 20000 would be much faster as key value lookup */
|
||||
));
|
||||
}
|
||||
|
||||
});
|
||||
}
|
||||
|
||||
const setupGraphBrush = (
|
||||
svg,
|
||||
handleBrushSelectAction,
|
||||
handleBrushDeselectAction
|
||||
) => {
|
||||
svg.append("g")
|
||||
.call(
|
||||
d3.brush()
|
||||
.extent([
|
||||
[0, 0],
|
||||
[width, height]
|
||||
])
|
||||
.on("brush", handleBrushSelectAction)
|
||||
.on("end", handleBrushDeselectAction)
|
||||
);
|
||||
}
|
||||
|
||||
@@ -18,6 +18,7 @@ import ColorControl from "../controls/color";
|
||||
metadata,
|
||||
color: state.controls.color,
|
||||
continuousSelection: state.controls.continuousSelection,
|
||||
graphBrushSelection: state.controls.graphBrushSelection
|
||||
}
|
||||
})
|
||||
class Graph extends React.Component {
|
||||
@@ -27,33 +28,76 @@ class Graph extends React.Component {
|
||||
this.state = {
|
||||
drawn: false,
|
||||
svg: null,
|
||||
context: null,
|
||||
ctx: null,
|
||||
brush: null,
|
||||
};
|
||||
}
|
||||
handleBrushSelectAction() {
|
||||
/*
|
||||
No idea why d3 event scope works like this
|
||||
but apparently
|
||||
it does
|
||||
https://bl.ocks.org/EfratVil/0e542f5fc426065dd1d4b6daaa345a9f
|
||||
*/
|
||||
const s = d3.event.selection;
|
||||
/*
|
||||
event describing brush position:
|
||||
@-------|
|
||||
| |
|
||||
| |
|
||||
|-------@
|
||||
*/
|
||||
const brushCoords = {
|
||||
northwestX: s[0][0],
|
||||
northwestY: s[0][1],
|
||||
southeastX: s[1][0],
|
||||
southeastY: s[1][1]
|
||||
}
|
||||
|
||||
brushCoords.dx = brushCoords.southeastX - brushCoords.northwestX;
|
||||
brushCoords.dy = brushCoords.southeastY - brushCoords.northwestY;
|
||||
|
||||
this.props.dispatch({
|
||||
type: "graph brush selection change",
|
||||
brushCoords
|
||||
})
|
||||
}
|
||||
handleBrushDeselectAction() {
|
||||
// function brushended() {
|
||||
// if (!d3.event.selection) {
|
||||
// console.log('graph brush deselect')
|
||||
// }
|
||||
// }
|
||||
|
||||
console.log('handle deselect')
|
||||
}
|
||||
componentWillReceiveProps(nextProps) {
|
||||
/* maybe should do a check here to confirm ref exists and pass it? */
|
||||
if (
|
||||
this.state.context &&
|
||||
this.state.ctx &&
|
||||
nextProps.vertices
|
||||
// nextProps.expressions &&
|
||||
// nextProps.expressionsCountsMap &&
|
||||
) {
|
||||
drawGraph(
|
||||
nextProps.vertices,
|
||||
this.state.context,
|
||||
this.state.ctx,
|
||||
nextProps.expressionsCountsMap,
|
||||
nextProps.color,
|
||||
nextProps.ranges, /* assumption that this exists if vertices does both are on cells */
|
||||
nextProps.metadata,
|
||||
nextProps.continuousSelection, /* continuousSelected should probably inform a global 'is active' array rather than be consumed so specifically here */
|
||||
nextProps.graphBrushSelection,
|
||||
)
|
||||
}
|
||||
}
|
||||
|
||||
componentDidMount() {
|
||||
const {svg, context} = setupGraphElements();
|
||||
this.setState({svg, context});
|
||||
const {svg, ctx} = setupGraphElements(
|
||||
this.handleBrushSelectAction.bind(this),
|
||||
this.handleBrushDeselectAction.bind(this)
|
||||
);
|
||||
this.setState({svg, ctx});
|
||||
}
|
||||
|
||||
render() {
|
||||
|
||||
Vendored
+5
@@ -1,6 +1,7 @@
|
||||
const Controls = (state = {
|
||||
color: null,
|
||||
continuousSelection: null,
|
||||
graphBrushSelection: null
|
||||
}, action) => {
|
||||
switch (action.type) {
|
||||
case "color changed":
|
||||
@@ -12,6 +13,10 @@ const Controls = (state = {
|
||||
continuousSelection: action.data,
|
||||
});
|
||||
}
|
||||
case "graph brush selection change":
|
||||
return Object.assign({}, state, {
|
||||
graphBrushSelection: action.brushCoords
|
||||
})
|
||||
default:
|
||||
return state;
|
||||
}
|
||||
|
||||
Reference in New Issue
Block a user