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Upgrade to tiledb 2.0 (#1485)

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* Upgrade to tiledb 2.0
This commit is contained in:
bmccandless
2020-05-21 14:55:11 -07:00
committed by GitHub
parent 889b582538
commit 4d100d4507
2 changed files with 2 additions and 2 deletions
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server/converters/cxgtool.py
+1 -1
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@@ -366,7 +366,7 @@ def create_emb(e_name, emb):
dims = [] dims = []
for d in range(emb.ndim): for d in range(emb.ndim):
shape = emb.shape shape = emb.shape
dims.append(tiledb.Dim("", domain=(0, shape[d] - 1), tile=min(shape[d], 1000), dtype=np.uint32)) dims.append(tiledb.Dim(domain=(0, shape[d] - 1), tile=min(shape[d], 1000), dtype=np.uint32))
domain = tiledb.Domain(*dims) domain = tiledb.Domain(*dims)
schema = tiledb.ArraySchema( schema = tiledb.ArraySchema(
domain=domain, sparse=False, attrs=attrs, capacity=1_000_000, cell_order="row-major", tile_order="row-major" domain=domain, sparse=False, attrs=attrs, capacity=1_000_000, cell_order="row-major", tile_order="row-major"
server/requirements.txt
+1 -1
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@@ -17,6 +17,6 @@ pandas>=0.24.2
PyYAML>=5.3 PyYAML>=5.3
scipy>=1.3.0 scipy>=1.3.0
requests>=2.22.0 requests>=2.22.0
tiledb==0.5.9 tiledb>=0.5.9,!=0.6.0
s3fs>=0.4.2 s3fs>=0.4.2
gunicorn>=20.0.4 gunicorn>=20.0.4