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Code Issues Packages Projects Releases Wiki Activity

update requirements for server (#2172)

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This commit is contained in:
Bruce Martin
2021-04-21 17:12:16 -07:00
committed by GitHub
parent 876ceb4d8b
commit 860547ced1
2 changed files with 7 additions and 6 deletions
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backend/server/requirements-prepare.txt
+1 -1
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@@ -1,2 +1,2 @@
python-igraph python-igraph>=0.8
louvain>=0.6 louvain>=0.6
backend/server/requirements.txt
+6 -5
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@@ -4,7 +4,7 @@ click>=7.1.2
fastobo>=0.6.1 fastobo>=0.6.1
Flask>=1.0.2 Flask>=1.0.2
Flask-Compress>=1.4.0 Flask-Compress>=1.4.0
Flask-Cors>=3.0.6 Flask-Cors>=3.0.9 # CVE-2020-25032
Flask-RESTful>=0.3.6 Flask-RESTful>=0.3.6
flask-server-timing>=0.1.2 flask-server-timing>=0.1.2
flask-talisman>=0.7.0 flask-talisman>=0.7.0
@@ -13,12 +13,13 @@ flatten-dict>=0.2.0
fsspec>=0.4.4,<0.8.0 fsspec>=0.4.4,<0.8.0
gunicorn>=20.0.4 gunicorn>=20.0.4
h5py<3.0.0 # h5py>=3.0.0 had a breaking change; there is a fix in anndata>=0.7.5 h5py<3.0.0 # h5py>=3.0.0 had a breaking change; there is a fix in anndata>=0.7.5
numba>=0.49.1,<0.53.0 jinja2>=2.11.3 # Flask sub-dependency. Added due to CVE-2020-28493
numpy>=1.15.0 numba>=0.51.2,<0.53.0
numpy>=1.17.5
packaging>=20.0 packaging>=20.0
pandas>=1.0,!=1.1 # pandas 1.1 breaks tests, https://github.com/pandas-dev/pandas/issues/35446 pandas>=1.0,!=1.1 # pandas 1.1 breaks tests, https://github.com/pandas-dev/pandas/issues/35446
PyYAML>=5.3 PyYAML>=5.4 # CVE-2020-14343
scipy>=1.0 scipy>=1.4
requests>=2.22.0 requests>=2.22.0
s3fs==0.4.2 s3fs==0.4.2
scanpy==1.4.6 # Until we move to anndata 0.7.4 scanpy needs to be pinned here scanpy==1.4.6 # Until we move to anndata 0.7.4 scanpy needs to be pinned here