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Add note about installing hdf5 to FAQ (#581)

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Sidney Bell
2019-02-08 14:56:16 -08:00
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@@ -191,9 +191,13 @@ Currently this is not supported directly, but you should be able to do this manu
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> I tried to `pip install cellxgene` and got a weird error I don't understand
> I tried to `pip install cellxgene` and got a weird error about missing paths to an HDF5 library?
This may happen, especially as we work out bugs in our installation process! Please create a new [Github issue](https://github.com/chanzuckerberg/cellxgene/issues), explain what you did, and include all the error messages you saw. It'd also be super helpful if you call `pip freeze` and include the full output alongside your issue.
You probably just need to install HDF5 first. If you're on a mac, you can simply `brew install hdf5` and then try `pip install cellxgene` again.
> I tried to `pip install cellxgene` and got another weird error I don't understand
This may happen, especially as we work out bugs in our installation process! Please create a new [Github issue](https://github.com/chanzuckerberg/cellxgene/issues), explain what you did, and include all the error messages you saw. It'd also be super helpful if you call `pip freeze` and include the full output alongside your issue.
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