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Justin Kiggins
2018-12-20 14:28:05 -08:00
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_cellxgene_ is an interactive data explorer for single-cell transcriptomics data designed to handle large datasets (1 million cells or more) and integrate with your favorite analysis tools
_cellxgene_ is an interactive data explorer for single-cell transcriptomics data. Whether you need to visualize one thousand cells or one million, _cellxgene_ helps you gain insight into your single-cell data.
## features
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## getting started
Install the package
_cellxgene_ requires **Python 3.6**
Install the package.
``` bash
pip install cellxgene
```
Download an example file
Download an example [anndata](https://anndata.readthedocs.io/en/latest/) file
``` bash
curl -o pbmc3k.h5ad https://raw.githubusercontent.com/chanzuckerberg/cellxgene/master/example-dataset/pbmc3k.h5ad