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Code Issues Packages Projects Releases Wiki Activity

Simplify CI checks on git push, add nightly checks on cron (#1158)

Browse Source 
* Switch push tests to Github Actions

* Add nightly tests

* Add anndata check

* Add test status badges

* Add anndata 0.6.22.post1 workaround

* Rename Nightly tests to Compatibility Tests

* Fix to anndata fix

* Turn on cron schedule

* Fix badge mardown in README.md

* Fix cron schedule
This commit is contained in:
Matt Weiden
2020-02-18 11:57:19 -08:00
committed by GitHub
parent d30087ca63
commit c630be33df
6 changed files with 216 additions and 33 deletions
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.github/workflows/push_tests.yml
+101
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name: Push Tests
on: [push]
env:
JEST_ENV: prod
jobs:
lint:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2
- name: Set up Python 3.7
uses: actions/setup-python@v1
with:
python-version: 3.7
- name: Lint with flake8
run: |
pip install flake8
make lint
unit-test:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2
- name: Set up Python 3.7
uses: actions/setup-python@v1
with:
python-version: 3.7
- name: Python cache
uses: actions/cache@v1
with:
path: ~/.cache/pip
key: ${{ runner.os }}-pip-${{ hashFiles('**/requirements*.txt') }}
restore-keys: |
${{ runner.os }}-pip-
- name: Node cache
uses: actions/cache@v1
with:
path: ~/.npm
key: ${{ runner.os }}-node-${{ hashFiles('**/package-lock.json') }}
restore-keys: |
${{ runner.os }}-node-
- name: Install dependencies
run: make pydist install-dist dev-env-server
- name: Unit tests
run: make unit-test
smoke-tests:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2
- name: Set up Python 3.7
uses: actions/setup-python@v1
with:
python-version: 3.7
- name: Python cache
uses: actions/cache@v1
with:
path: ~/.cache/pip
key: ${{ runner.os }}-pip-${{ hashFiles('**/requirements*.txt') }}
restore-keys: |
${{ runner.os }}-pip-
- name: Node cache
uses: actions/cache@v1
with:
path: ~/.npm
key: ${{ runner.os }}-node-${{ hashFiles('**/package-lock.json') }}
restore-keys: |
${{ runner.os }}-node-
- name: Install dependencies
run: make pydist install-dist
- name: Smoke tests (without annotations feature)
run: cd client && make smoke-test
smoke-tests-annotations:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2
- name: Set up Python 3.7
uses: actions/setup-python@v1
with:
python-version: 3.7
- name: Python cache
uses: actions/cache@v1
with:
path: ~/.cache/pip
key: ${{ runner.os }}-pip-${{ hashFiles('**/requirements*.txt') }}
restore-keys: |
${{ runner.os }}-pip-
- name: Node cache
uses: actions/cache@v1
with:
path: ~/.npm
key: ${{ runner.os }}-node-${{ hashFiles('**/package-lock.json') }}
restore-keys: |
${{ runner.os }}-node-
- name: Install dependencies
run: make pydist install-dist
- name: Smoke tests (with annotations feature)
run: cd client && make smoke-test-annotations